Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN6P56747 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN6P56747 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLDN6P56747 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN6P56747 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.63■□□□□ 0.57
CLDN6P56747 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.63■□□□□ 0.57
CLDN6P56747 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.63■□□□□ 0.57
CLDN6P56747 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN6P56747 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLDN6P56747 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLDN6P56747 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN6P56747 KRT8P45-201ENST00000414328 1447 ntBASIC18.63■□□□□ 0.57
CLDN6P56747 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN6P56747 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLDN6P56747 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.63■□□□□ 0.57
CLDN6P56747 AC092720.2-201ENST00000602388 1665 ntBASIC18.63■□□□□ 0.57
CLDN6P56747 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLDN6P56747 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN6P56747 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN6P56747 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN6P56747 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.62■□□□□ 0.57
CLDN6P56747 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN6P56747 AL353719.1-201ENST00000566847 864 ntBASIC18.62■□□□□ 0.57
CLDN6P56747 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.62■□□□□ 0.57
CLDN6P56747 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN6P56747 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.62■□□□□ 0.57
CLDN6P56747 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN6P56747 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN6P56747 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN6P56747 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN6P56747 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN6P56747 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.62■□□□□ 0.57
CLDN6P56747 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CLDN6P56747 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLDN6P56747 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.61■□□□□ 0.57
CLDN6P56747 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.61■□□□□ 0.57
CLDN6P56747 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLDN6P56747 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
CLDN6P56747 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 HOMER2P1-201ENST00000455653 964 ntBASIC18.61■□□□□ 0.57
CLDN6P56747 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN6P56747 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.61■□□□□ 0.57
CLDN6P56747 AP003041.3-201ENST00000527151 707 ntBASIC18.61■□□□□ 0.57
CLDN6P56747 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 AC116407.4-201ENST00000623319 1061 ntBASIC18.61■□□□□ 0.57
CLDN6P56747 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN6P56747 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN6P56747 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.61■□□□□ 0.57
CLDN6P56747 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLDN6P56747 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
CLDN6P56747 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN6P56747 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLDN6P56747 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN6P56747 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN6P56747 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN6P56747 TSPY17P-201ENST00000450329 467 ntBASIC18.6■□□□□ 0.57
CLDN6P56747 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN6P56747 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.6■□□□□ 0.57
CLDN6P56747 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.6■□□□□ 0.57
CLDN6P56747 PRSS44-201ENST00000515154 1146 ntBASIC18.6■□□□□ 0.57
CLDN6P56747 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN6P56747 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.6■□□□□ 0.57
CLDN6P56747 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN6P56747 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN6P56747 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLDN6P56747 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN6P56747 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN6P56747 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN6P56747 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLDN6P56747 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLDN6P56747 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN6P56747 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.59■□□□□ 0.57
CLDN6P56747 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.59■□□□□ 0.57
CLDN6P56747 VENTXP5-201ENST00000523979 775 ntBASIC18.59■□□□□ 0.57
CLDN6P56747 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.59■□□□□ 0.57
CLDN6P56747 AC069148.1-201ENST00000608741 768 ntBASIC18.59■□□□□ 0.57
CLDN6P56747 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN6P56747 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN6P56747 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLDN6P56747 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.58■□□□□ 0.57
CLDN6P56747 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms