Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.46□□□□□ -0.09
CMC4P56277 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CMC4P56277 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.46□□□□□ -0.09
CMC4P56277 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CMC4P56277 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CMC4P56277 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.46□□□□□ -0.09
CMC4P56277 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.46□□□□□ -0.09
CMC4P56277 RPS2P4-201ENST00000476944 856 ntBASIC14.46□□□□□ -0.09
CMC4P56277 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.46□□□□□ -0.09
CMC4P56277 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.46□□□□□ -0.09
CMC4P56277 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.46□□□□□ -0.09
CMC4P56277 AL160286.2-201ENST00000567150 934 ntBASIC14.46□□□□□ -0.09
CMC4P56277 AC026271.3-201ENST00000571884 352 ntBASIC14.46□□□□□ -0.09
CMC4P56277 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.46□□□□□ -0.09
CMC4P56277 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CMC4P56277 AL391422.3-201ENST00000603791 2761 ntBASIC14.46□□□□□ -0.09
CMC4P56277 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CMC4P56277 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.46□□□□□ -0.09
CMC4P56277 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
CMC4P56277 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CMC4P56277 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CMC4P56277 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CMC4P56277 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CMC4P56277 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CMC4P56277 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.46□□□□□ -0.1
CMC4P56277 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.45□□□□□ -0.1
CMC4P56277 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CMC4P56277 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.45□□□□□ -0.1
CMC4P56277 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CMC4P56277 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CMC4P56277 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.45□□□□□ -0.1
CMC4P56277 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.45□□□□□ -0.1
CMC4P56277 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.45□□□□□ -0.1
CMC4P56277 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.45□□□□□ -0.1
CMC4P56277 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.45□□□□□ -0.1
CMC4P56277 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.45□□□□□ -0.1
CMC4P56277 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.45□□□□□ -0.1
CMC4P56277 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.45□□□□□ -0.1
CMC4P56277 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.45□□□□□ -0.1
CMC4P56277 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.45□□□□□ -0.1
CMC4P56277 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.45□□□□□ -0.1
CMC4P56277 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
CMC4P56277 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.45□□□□□ -0.1
CMC4P56277 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CMC4P56277 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CMC4P56277 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC14.45□□□□□ -0.1
CMC4P56277 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CMC4P56277 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CMC4P56277 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.44□□□□□ -0.1
CMC4P56277 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CMC4P56277 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.44□□□□□ -0.1
CMC4P56277 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CMC4P56277 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.44□□□□□ -0.1
CMC4P56277 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.44□□□□□ -0.1
CMC4P56277 AL355355.2-201ENST00000442321 338 ntBASIC14.44□□□□□ -0.1
CMC4P56277 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 AL049637.2-201ENST00000641778 930 ntBASIC14.44□□□□□ -0.1
CMC4P56277 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMC4P56277 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms