Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
FOXG1P55316 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXG1P55316 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 AC008040.2-201ENST00000461049 708 ntBASIC17.02■□□□□ 0.32
FOXG1P55316 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.02■□□□□ 0.32
FOXG1P55316 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.02■□□□□ 0.32
FOXG1P55316 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.02■□□□□ 0.32
FOXG1P55316 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXG1P55316 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.02■□□□□ 0.32
FOXG1P55316 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FOXG1P55316 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.02■□□□□ 0.31
FOXG1P55316 AC104417.2-201ENST00000562989 1793 ntBASIC17.02■□□□□ 0.31
FOXG1P55316 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FOXG1P55316 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FOXG1P55316 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.01■□□□□ 0.31
FOXG1P55316 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXG1P55316 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXG1P55316 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXG1P55316 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXG1P55316 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
FOXG1P55316 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
FOXG1P55316 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXG1P55316 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXG1P55316 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
FOXG1P55316 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXG1P55316 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXG1P55316 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXG1P55316 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.01■□□□□ 0.31
FOXG1P55316 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.01■□□□□ 0.31
FOXG1P55316 Z85996.1-201ENST00000494644 937 ntBASIC17.01■□□□□ 0.31
FOXG1P55316 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.01■□□□□ 0.31
FOXG1P55316 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.01■□□□□ 0.31
FOXG1P55316 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXG1P55316 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.01■□□□□ 0.31
FOXG1P55316 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.01■□□□□ 0.31
FOXG1P55316 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXG1P55316 AL160286.2-201ENST00000567150 934 ntBASIC17.01■□□□□ 0.31
FOXG1P55316 AC131212.4-201ENST00000623606 975 ntBASIC17.01■□□□□ 0.31
FOXG1P55316 AL031985.4-201ENST00000642138 673 ntBASIC17.01■□□□□ 0.31
FOXG1P55316 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXG1P55316 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
FOXG1P55316 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXG1P55316 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
FOXG1P55316 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
FOXG1P55316 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXG1P55316 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXG1P55316 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
FOXG1P55316 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
FOXG1P55316 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17■□□□□ 0.31
FOXG1P55316 KRT17P2-201ENST00000300992 1314 ntBASIC17■□□□□ 0.31
FOXG1P55316 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
FOXG1P55316 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
FOXG1P55316 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXG1P55316 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FOXG1P55316 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXG1P55316 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXG1P55316 ZNF815P-204ENST00000434898 1737 ntBASIC17■□□□□ 0.31
FOXG1P55316 SDHAP1-207ENST00000440850 2000 ntBASIC17■□□□□ 0.31
FOXG1P55316 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXG1P55316 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17■□□□□ 0.31
FOXG1P55316 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
FOXG1P55316 AC116562.2-201ENST00000507042 360 ntBASIC17■□□□□ 0.31
FOXG1P55316 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
FOXG1P55316 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXG1P55316 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17■□□□□ 0.31
FOXG1P55316 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17■□□□□ 0.31
FOXG1P55316 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17■□□□□ 0.31
FOXG1P55316 MIR6786-201ENST00000616843 113 ntBASIC17■□□□□ 0.31
FOXG1P55316 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17■□□□□ 0.31
FOXG1P55316 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXG1P55316 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17■□□□□ 0.31
FOXG1P55316 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17■□□□□ 0.31
FOXG1P55316 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXG1P55316 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17■□□□□ 0.31
FOXG1P55316 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXG1P55316 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
FOXG1P55316 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXG1P55316 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
FOXG1P55316 Z82202.1-201ENST00000623446 1880 ntBASIC16.99■□□□□ 0.31
FOXG1P55316 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXG1P55316 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXG1P55316 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
FOXG1P55316 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXG1P55316 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.99■□□□□ 0.31
FOXG1P55316 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms