Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
APOC4P55056 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
APOC4P55056 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
APOC4P55056 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.21□□□□□ -0.13
APOC4P55056 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.21□□□□□ -0.13
APOC4P55056 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.21□□□□□ -0.13
APOC4P55056 TSPY15P-201ENST00000457163 923 ntBASIC14.21□□□□□ -0.13
APOC4P55056 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.21□□□□□ -0.13
APOC4P55056 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.21□□□□□ -0.13
APOC4P55056 FITM1-202ENST00000559294 800 ntBASIC14.21□□□□□ -0.13
APOC4P55056 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.21□□□□□ -0.13
APOC4P55056 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.21□□□□□ -0.13
APOC4P55056 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOC4P55056 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOC4P55056 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
APOC4P55056 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC4P55056 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
APOC4P55056 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
APOC4P55056 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC4P55056 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
APOC4P55056 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC4P55056 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
APOC4P55056 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC4P55056 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
APOC4P55056 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.2□□□□□ -0.14
APOC4P55056 FAM207BP-201ENST00000447172 505 ntBASIC14.2□□□□□ -0.14
APOC4P55056 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 AC097488.1-201ENST00000507834 756 ntBASIC14.2□□□□□ -0.14
APOC4P55056 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.2□□□□□ -0.14
APOC4P55056 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC4P55056 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.2□□□□□ -0.14
APOC4P55056 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC4P55056 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
APOC4P55056 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.2□□□□□ -0.14
APOC4P55056 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
APOC4P55056 RCC2P6-201ENST00000526625 1557 ntBASIC14.2□□□□□ -0.14
APOC4P55056 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC4P55056 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
APOC4P55056 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.2□□□□□ -0.14
APOC4P55056 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC4P55056 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC4P55056 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC4P55056 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
APOC4P55056 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.19□□□□□ -0.14
APOC4P55056 AC079598.2-202ENST00000546624 1451 ntBASIC14.19□□□□□ -0.14
APOC4P55056 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
APOC4P55056 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.19□□□□□ -0.14
APOC4P55056 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.19□□□□□ -0.14
APOC4P55056 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.19□□□□□ -0.14
APOC4P55056 SLC25A1P4-201ENST00000567977 778 ntBASIC14.19□□□□□ -0.14
APOC4P55056 AP005242.2-201ENST00000580065 1175 ntBASIC14.19□□□□□ -0.14
APOC4P55056 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.19□□□□□ -0.14
APOC4P55056 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.19□□□□□ -0.14
APOC4P55056 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.19□□□□□ -0.14
APOC4P55056 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.19□□□□□ -0.14
APOC4P55056 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
APOC4P55056 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC4P55056 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms