Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC012306.2-201ENST00000609350 630 ntBASIC17.35■□□□□ 0.37
LHX2P50458 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.35■□□□□ 0.37
LHX2P50458 AC097493.4-201ENST00000641197 219 ntBASIC17.35■□□□□ 0.37
LHX2P50458 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX2P50458 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
LHX2P50458 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.35■□□□□ 0.37
LHX2P50458 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX2P50458 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LHX2P50458 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX2P50458 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX2P50458 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX2P50458 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX2P50458 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX2P50458 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX2P50458 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX2P50458 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX2P50458 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.34■□□□□ 0.37
LHX2P50458 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX2P50458 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LHX2P50458 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX2P50458 KRT8P41-201ENST00000533985 1514 ntBASIC17.34■□□□□ 0.37
LHX2P50458 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.34■□□□□ 0.37
LHX2P50458 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.34■□□□□ 0.37
LHX2P50458 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX2P50458 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX2P50458 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.34■□□□□ 0.37
LHX2P50458 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
LHX2P50458 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.33■□□□□ 0.37
LHX2P50458 AC104417.2-201ENST00000562989 1793 ntBASIC17.33■□□□□ 0.37
LHX2P50458 ZNF815P-204ENST00000434898 1737 ntBASIC17.33■□□□□ 0.37
LHX2P50458 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.33■□□□□ 0.37
LHX2P50458 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LHX2P50458 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX2P50458 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX2P50458 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LHX2P50458 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.33■□□□□ 0.36
LHX2P50458 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX2P50458 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.33■□□□□ 0.36
LHX2P50458 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.33■□□□□ 0.36
LHX2P50458 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX2P50458 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX2P50458 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
LHX2P50458 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 CYP2D8P-201ENST00000433633 1490 ntBASIC17.32■□□□□ 0.36
LHX2P50458 AC125437.2-201ENST00000625180 2167 ntBASIC17.32■□□□□ 0.36
LHX2P50458 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 AC096733.2-201ENST00000609937 1394 ntBASIC17.32■□□□□ 0.36
LHX2P50458 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LHX2P50458 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX2P50458 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX2P50458 NAPSB-206ENST00000562112 1266 ntBASIC17.32■□□□□ 0.36
LHX2P50458 SLC25A1P4-201ENST00000567977 778 ntBASIC17.32■□□□□ 0.36
LHX2P50458 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.32■□□□□ 0.36
LHX2P50458 AC010947.1-201ENST00000623454 693 ntBASIC17.32■□□□□ 0.36
LHX2P50458 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.32■□□□□ 0.36
LHX2P50458 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LHX2P50458 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX2P50458 TREX1-205ENST00000625293 1783 ntBASIC17.32■□□□□ 0.36
LHX2P50458 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LHX2P50458 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX2P50458 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX2P50458 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LHX2P50458 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX2P50458 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX2P50458 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LHX2P50458 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LHX2P50458 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LHX2P50458 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX2P50458 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LHX2P50458 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX2P50458 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LHX2P50458 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX2P50458 CRYGFP-201ENST00000418459 633 ntBASIC17.31■□□□□ 0.36
LHX2P50458 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.31■□□□□ 0.36
LHX2P50458 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX2P50458 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LHX2P50458 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
LHX2P50458 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX2P50458 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX2P50458 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LHX2P50458 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms