Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDKN2CP42773 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CDKN2CP42773 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2CP42773 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2CP42773 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.31■□□□□ 0.52
CDKN2CP42773 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 AC006970.2-201ENST00000450065 779 ntBASIC18.31■□□□□ 0.52
CDKN2CP42773 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.31■□□□□ 0.52
CDKN2CP42773 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
CDKN2CP42773 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.31■□□□□ 0.52
CDKN2CP42773 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.31■□□□□ 0.52
CDKN2CP42773 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKN2CP42773 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2CP42773 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2CP42773 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDKN2CP42773 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CDKN2CP42773 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 AC104417.2-201ENST00000562989 1793 ntBASIC18.3■□□□□ 0.52
CDKN2CP42773 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.3■□□□□ 0.52
CDKN2CP42773 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDKN2CP42773 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKN2CP42773 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDKN2CP42773 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDKN2CP42773 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDKN2CP42773 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKN2CP42773 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDKN2CP42773 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2CP42773 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKN2CP42773 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CDKN2CP42773 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDKN2CP42773 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDKN2CP42773 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKN2CP42773 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.29■□□□□ 0.52
CDKN2CP42773 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKN2CP42773 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKN2CP42773 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKN2CP42773 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.29■□□□□ 0.52
CDKN2CP42773 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDKN2CP42773 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDKN2CP42773 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKN2CP42773 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDKN2CP42773 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKN2CP42773 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKN2CP42773 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDKN2CP42773 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKN2CP42773 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDKN2CP42773 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKN2CP42773 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKN2CP42773 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDKN2CP42773 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.28■□□□□ 0.52
CDKN2CP42773 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CDKN2CP42773 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKN2CP42773 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.28■□□□□ 0.52
CDKN2CP42773 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.28■□□□□ 0.52
CDKN2CP42773 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKN2CP42773 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms