Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFSF9P41273 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TNFSF9P41273 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
TNFSF9P41273 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TNFSF9P41273 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TNFSF9P41273 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.01■□□□□ 0.95
TNFSF9P41273 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.01■□□□□ 0.95
TNFSF9P41273 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.01■□□□□ 0.95
TNFSF9P41273 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.01■□□□□ 0.95
TNFSF9P41273 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TNFSF9P41273 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.01■□□□□ 0.95
TNFSF9P41273 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TNFSF9P41273 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TNFSF9P41273 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TNFSF9P41273 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21■□□□□ 0.95
TNFSF9P41273 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21■□□□□ 0.95
TNFSF9P41273 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21■□□□□ 0.95
TNFSF9P41273 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21■□□□□ 0.95
TNFSF9P41273 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 GXYLT1P3-201ENST00000453058 1193 ntBASIC21■□□□□ 0.95
TNFSF9P41273 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 BX088651.1-201ENST00000540551 451 ntBASIC21■□□□□ 0.95
TNFSF9P41273 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21■□□□□ 0.95
TNFSF9P41273 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
TNFSF9P41273 SDHAP1-207ENST00000440850 2000 ntBASIC21■□□□□ 0.95
TNFSF9P41273 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TNFSF9P41273 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF9P41273 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF9P41273 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF9P41273 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF9P41273 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.99■□□□□ 0.95
TNFSF9P41273 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF9P41273 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF9P41273 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.99■□□□□ 0.95
TNFSF9P41273 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.99■□□□□ 0.95
TNFSF9P41273 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TNFSF9P41273 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.99■□□□□ 0.95
TNFSF9P41273 AP000525.1-201ENST00000608286 694 ntBASIC20.99■□□□□ 0.95
TNFSF9P41273 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.99■□□□□ 0.95
TNFSF9P41273 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.99■□□□□ 0.95
TNFSF9P41273 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TNFSF9P41273 FSCN1P1-201ENST00000568912 1481 ntBASIC20.99■□□□□ 0.95
TNFSF9P41273 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TNFSF9P41273 KRT8P41-201ENST00000533985 1514 ntBASIC20.99■□□□□ 0.95
TNFSF9P41273 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TNFSF9P41273 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF9P41273 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF9P41273 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TNFSF9P41273 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.98■□□□□ 0.95
TNFSF9P41273 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TNFSF9P41273 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF9P41273 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
TNFSF9P41273 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFSF9P41273 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF9P41273 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.98■□□□□ 0.95
TNFSF9P41273 AC091390.4-202ENST00000476426 537 ntBASIC20.98■□□□□ 0.95
TNFSF9P41273 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF9P41273 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFSF9P41273 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.98■□□□□ 0.95
TNFSF9P41273 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF9P41273 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF9P41273 Z82202.1-201ENST00000623446 1880 ntBASIC20.98■□□□□ 0.95
TNFSF9P41273 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF9P41273 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.98■□□□□ 0.95
TNFSF9P41273 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TNFSF9P41273 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TNFSF9P41273 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF9P41273 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.97■□□□□ 0.95
TNFSF9P41273 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF9P41273 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF9P41273 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF9P41273 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TNFSF9P41273 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TNFSF9P41273 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF9P41273 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF9P41273 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.97■□□□□ 0.95
TNFSF9P41273 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TNFSF9P41273 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TNFSF9P41273 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.97■□□□□ 0.95
TNFSF9P41273 AL390955.1-201ENST00000428694 934 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms