Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.6■□□□□ 0.73
HADHAP40939 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HADHAP40939 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.6■□□□□ 0.73
HADHAP40939 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.6■□□□□ 0.73
HADHAP40939 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HADHAP40939 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HADHAP40939 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HADHAP40939 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HADHAP40939 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HADHAP40939 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.59■□□□□ 0.73
HADHAP40939 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.59■□□□□ 0.73
HADHAP40939 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.59■□□□□ 0.73
HADHAP40939 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 AL032819.2-201ENST00000624543 2162 ntBASIC19.59■□□□□ 0.73
HADHAP40939 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
HADHAP40939 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HADHAP40939 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.59■□□□□ 0.73
HADHAP40939 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.59■□□□□ 0.73
HADHAP40939 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 AC069544.1-201ENST00000609399 999 ntBASIC19.59■□□□□ 0.73
HADHAP40939 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HADHAP40939 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HADHAP40939 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.59■□□□□ 0.73
HADHAP40939 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
HADHAP40939 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HADHAP40939 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.59■□□□□ 0.73
HADHAP40939 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.59■□□□□ 0.73
HADHAP40939 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HADHAP40939 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
HADHAP40939 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HADHAP40939 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.58■□□□□ 0.73
HADHAP40939 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HADHAP40939 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HADHAP40939 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HADHAP40939 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HADHAP40939 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.58■□□□□ 0.73
HADHAP40939 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HADHAP40939 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HADHAP40939 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HADHAP40939 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HADHAP40939 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HADHAP40939 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HADHAP40939 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
HADHAP40939 TSPY20P-201ENST00000450910 630 ntBASIC19.58■□□□□ 0.72
HADHAP40939 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.58■□□□□ 0.72
HADHAP40939 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.58■□□□□ 0.72
HADHAP40939 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.58■□□□□ 0.72
HADHAP40939 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HADHAP40939 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.58■□□□□ 0.72
HADHAP40939 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.58■□□□□ 0.72
HADHAP40939 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HADHAP40939 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HADHAP40939 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HADHAP40939 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HADHAP40939 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HADHAP40939 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HADHAP40939 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
HADHAP40939 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.58■□□□□ 0.72
HADHAP40939 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HADHAP40939 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.57■□□□□ 0.72
HADHAP40939 FAM201B-201ENST00000458407 597 ntBASIC19.57■□□□□ 0.72
HADHAP40939 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.57■□□□□ 0.72
HADHAP40939 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.57■□□□□ 0.72
HADHAP40939 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
HADHAP40939 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.57■□□□□ 0.72
HADHAP40939 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HADHAP40939 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HADHAP40939 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HADHAP40939 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.56■□□□□ 0.72
HADHAP40939 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.56■□□□□ 0.72
HADHAP40939 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HADHAP40939 HCG11-201ENST00000411553 5696 ntBASIC19.56■□□□□ 0.72
HADHAP40939 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.56■□□□□ 0.72
HADHAP40939 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
HADHAP40939 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HADHAP40939 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms