Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
KRT9P35527 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT9P35527 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 AL390719.1-204ENST00000412397 1219 ntBASIC21.18■□□□□ 0.98
KRT9P35527 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.18■□□□□ 0.98
KRT9P35527 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.18■□□□□ 0.98
KRT9P35527 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.18■□□□□ 0.98
KRT9P35527 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT9P35527 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
KRT9P35527 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT9P35527 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT9P35527 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
KRT9P35527 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.18■□□□□ 0.98
KRT9P35527 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT9P35527 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 AC116351.2-201ENST00000606540 1585 ntBASIC21.18■□□□□ 0.98
KRT9P35527 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.18■□□□□ 0.98
KRT9P35527 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KRT9P35527 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT9P35527 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KRT9P35527 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT9P35527 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT9P35527 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT9P35527 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT9P35527 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KRT9P35527 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
KRT9P35527 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.17■□□□□ 0.98
KRT9P35527 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT9P35527 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KRT9P35527 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.17■□□□□ 0.98
KRT9P35527 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT9P35527 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
KRT9P35527 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.17■□□□□ 0.98
KRT9P35527 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.17■□□□□ 0.98
KRT9P35527 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT9P35527 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KRT9P35527 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KRT9P35527 AL049812.1-201ENST00000432563 2267 ntBASIC21.17■□□□□ 0.98
KRT9P35527 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
KRT9P35527 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT9P35527 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT9P35527 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT9P35527 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT9P35527 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
KRT9P35527 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KRT9P35527 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KRT9P35527 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT9P35527 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT9P35527 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT9P35527 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT9P35527 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.16■□□□□ 0.98
KRT9P35527 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT9P35527 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.16■□□□□ 0.98
KRT9P35527 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.16■□□□□ 0.98
KRT9P35527 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT9P35527 AC133041.1-202ENST00000642053 222 ntBASIC21.16■□□□□ 0.98
KRT9P35527 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT9P35527 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KRT9P35527 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.15■□□□□ 0.98
KRT9P35527 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
KRT9P35527 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
KRT9P35527 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT9P35527 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT9P35527 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT9P35527 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
KRT9P35527 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KRT9P35527 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
KRT9P35527 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.15■□□□□ 0.98
KRT9P35527 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.15■□□□□ 0.98
KRT9P35527 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT9P35527 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT9P35527 AC073210.2-201ENST00000430369 194 ntBASIC21.15■□□□□ 0.98
KRT9P35527 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.15■□□□□ 0.98
KRT9P35527 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.15■□□□□ 0.98
KRT9P35527 AC098934.4-201ENST00000564127 592 ntBASIC21.15■□□□□ 0.98
KRT9P35527 MYC-209ENST00000641252 345 ntBASIC21.15■□□□□ 0.98
KRT9P35527 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KRT9P35527 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
KRT9P35527 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
KRT9P35527 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.15■□□□□ 0.98
KRT9P35527 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT9P35527 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.14■□□□□ 0.98
KRT9P35527 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
KRT9P35527 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KRT9P35527 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.14■□□□□ 0.98
KRT9P35527 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT9P35527 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT9P35527 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
KRT9P35527 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT9P35527 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
KRT9P35527 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.14■□□□□ 0.97
KRT9P35527 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms