Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
PTPN7P35236 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PTPN7P35236 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN7P35236 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN7P35236 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PTPN7P35236 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN7P35236 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.05■□□□□ 0.8
PTPN7P35236 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.05■□□□□ 0.8
PTPN7P35236 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN7P35236 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN7P35236 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN7P35236 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN7P35236 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN7P35236 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN7P35236 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PTPN7P35236 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.04■□□□□ 0.8
PTPN7P35236 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN7P35236 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PTPN7P35236 AL109923.1-201ENST00000618799 583 ntBASIC20.04■□□□□ 0.8
PTPN7P35236 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN7P35236 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN7P35236 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PTPN7P35236 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
PTPN7P35236 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PTPN7P35236 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
PTPN7P35236 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN7P35236 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN7P35236 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN7P35236 AL049812.1-201ENST00000432563 2267 ntBASIC20.04■□□□□ 0.8
PTPN7P35236 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN7P35236 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN7P35236 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN7P35236 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN7P35236 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN7P35236 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PTPN7P35236 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN7P35236 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
PTPN7P35236 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PTPN7P35236 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN7P35236 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN7P35236 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PTPN7P35236 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN7P35236 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN7P35236 TUBB8P6-201ENST00000436895 1288 ntBASIC20.03■□□□□ 0.8
PTPN7P35236 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.03■□□□□ 0.8
PTPN7P35236 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN7P35236 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.03■□□□□ 0.8
PTPN7P35236 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.03■□□□□ 0.8
PTPN7P35236 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN7P35236 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN7P35236 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PTPN7P35236 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN7P35236 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN7P35236 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.03■□□□□ 0.8
PTPN7P35236 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PTPN7P35236 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN7P35236 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN7P35236 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN7P35236 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN7P35236 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PTPN7P35236 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN7P35236 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN7P35236 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN7P35236 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN7P35236 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN7P35236 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN7P35236 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN7P35236 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.02■□□□□ 0.8
PTPN7P35236 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.02■□□□□ 0.8
PTPN7P35236 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PTPN7P35236 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN7P35236 AC104771.1-201ENST00000603335 964 ntBASIC20.02■□□□□ 0.8
PTPN7P35236 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.02■□□□□ 0.8
PTPN7P35236 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN7P35236 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN7P35236 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN7P35236 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN7P35236 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN7P35236 AC006333.2-201ENST00000607957 2099 ntBASIC20.02■□□□□ 0.8
PTPN7P35236 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN7P35236 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN7P35236 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN7P35236 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN7P35236 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN7P35236 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN7P35236 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN7P35236 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN7P35236 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PTPN7P35236 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN7P35236 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms