Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.26□□□□□ -0.13
CKS2P33552 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.26□□□□□ -0.13
CKS2P33552 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.26□□□□□ -0.13
CKS2P33552 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.26□□□□□ -0.13
CKS2P33552 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC14.26□□□□□ -0.13
CKS2P33552 AC079140.4-201ENST00000507448 529 ntBASIC14.26□□□□□ -0.13
CKS2P33552 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC14.26□□□□□ -0.13
CKS2P33552 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.26□□□□□ -0.13
CKS2P33552 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.26□□□□□ -0.13
CKS2P33552 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CKS2P33552 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CKS2P33552 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CKS2P33552 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.26□□□□□ -0.13
CKS2P33552 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CKS2P33552 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CKS2P33552 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.25□□□□□ -0.13
CKS2P33552 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CKS2P33552 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CKS2P33552 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.25□□□□□ -0.13
CKS2P33552 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.25□□□□□ -0.13
CKS2P33552 AC008764.7-201ENST00000593779 1081 ntBASIC14.25□□□□□ -0.13
CKS2P33552 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.25□□□□□ -0.13
CKS2P33552 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.25□□□□□ -0.13
CKS2P33552 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.25□□□□□ -0.13
CKS2P33552 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CKS2P33552 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.25□□□□□ -0.13
CKS2P33552 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.24□□□□□ -0.13
CKS2P33552 AC020916.1-201ENST00000587762 1774 ntBASIC14.24□□□□□ -0.13
CKS2P33552 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CKS2P33552 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.24□□□□□ -0.13
CKS2P33552 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CKS2P33552 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 WIZP1-201ENST00000531444 2299 ntBASIC14.24□□□□□ -0.13
CKS2P33552 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CKS2P33552 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.24□□□□□ -0.13
CKS2P33552 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CKS2P33552 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 MIR572-201ENST00000384983 95 ntBASIC14.24□□□□□ -0.13
CKS2P33552 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.24□□□□□ -0.13
CKS2P33552 AC105265.2-201ENST00000467189 838 ntBASIC14.24□□□□□ -0.13
CKS2P33552 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.24□□□□□ -0.13
CKS2P33552 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CKS2P33552 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.24□□□□□ -0.13
CKS2P33552 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CKS2P33552 KRT8P17-201ENST00000453110 1448 ntBASIC14.24□□□□□ -0.13
CKS2P33552 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CKS2P33552 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms