Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCL1P22362 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CCL1P22362 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL1P22362 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL1P22362 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL1P22362 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL1P22362 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCL1P22362 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL1P22362 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL1P22362 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCL1P22362 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CCL1P22362 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 AC069152.1-201ENST00000438030 544 ntBASIC16.69■□□□□ 0.26
CCL1P22362 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL1P22362 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.69■□□□□ 0.26
CCL1P22362 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.69■□□□□ 0.26
CCL1P22362 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL1P22362 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCL1P22362 AC133041.1-202ENST00000642053 222 ntBASIC16.69■□□□□ 0.26
CCL1P22362 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 FP475955.4-201ENST00000623131 1990 ntBASIC16.69■□□□□ 0.26
CCL1P22362 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL1P22362 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CCL1P22362 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCL1P22362 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL1P22362 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL1P22362 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.68■□□□□ 0.26
CCL1P22362 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL1P22362 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL1P22362 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.68■□□□□ 0.26
CCL1P22362 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL1P22362 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.68■□□□□ 0.26
CCL1P22362 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.68■□□□□ 0.26
CCL1P22362 AC142086.2-201ENST00000569753 217 ntBASIC16.68■□□□□ 0.26
CCL1P22362 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL1P22362 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.68■□□□□ 0.26
CCL1P22362 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCL1P22362 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCL1P22362 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 IRX1P1-201ENST00000438849 1838 ntBASIC16.68■□□□□ 0.26
CCL1P22362 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL1P22362 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 AC093525.10-201ENST00000625130 1569 ntBASIC16.68■□□□□ 0.26
CCL1P22362 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL1P22362 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CCL1P22362 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL1P22362 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCL1P22362 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CCL1P22362 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.67■□□□□ 0.26
CCL1P22362 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL1P22362 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.67■□□□□ 0.26
CCL1P22362 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.67■□□□□ 0.26
CCL1P22362 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CCL1P22362 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL1P22362 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.67■□□□□ 0.26
CCL1P22362 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.67■□□□□ 0.26
CCL1P22362 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL1P22362 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL1P22362 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCL1P22362 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
CCL1P22362 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL1P22362 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL1P22362 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms