Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRKCAP17252 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PRKCAP17252 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PRKCAP17252 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PRKCAP17252 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PRKCAP17252 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PRKCAP17252 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.91■□□□□ 0.46
PRKCAP17252 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PRKCAP17252 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.91■□□□□ 0.46
PRKCAP17252 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PRKCAP17252 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.91■□□□□ 0.46
PRKCAP17252 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.91■□□□□ 0.46
PRKCAP17252 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 AL121829.2-201ENST00000620908 328 ntBASIC17.91■□□□□ 0.46
PRKCAP17252 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PRKCAP17252 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PRKCAP17252 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PRKCAP17252 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PRKCAP17252 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PRKCAP17252 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PRKCAP17252 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.9■□□□□ 0.46
PRKCAP17252 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.9■□□□□ 0.46
PRKCAP17252 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.9■□□□□ 0.46
PRKCAP17252 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.9■□□□□ 0.46
PRKCAP17252 KRT17P3-201ENST00000420566 1262 ntBASIC17.9■□□□□ 0.46
PRKCAP17252 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.9■□□□□ 0.46
PRKCAP17252 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.9■□□□□ 0.46
PRKCAP17252 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.9■□□□□ 0.46
PRKCAP17252 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.9■□□□□ 0.46
PRKCAP17252 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
PRKCAP17252 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PRKCAP17252 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PRKCAP17252 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PRKCAP17252 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
PRKCAP17252 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PRKCAP17252 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.89■□□□□ 0.45
PRKCAP17252 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.89■□□□□ 0.45
PRKCAP17252 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.89■□□□□ 0.45
PRKCAP17252 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.89■□□□□ 0.45
PRKCAP17252 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PRKCAP17252 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.89■□□□□ 0.45
PRKCAP17252 POU5F1P3-201ENST00000428824 1078 ntBASIC17.89■□□□□ 0.45
PRKCAP17252 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.89■□□□□ 0.45
PRKCAP17252 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.89■□□□□ 0.45
PRKCAP17252 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.89■□□□□ 0.45
PRKCAP17252 AC069544.1-201ENST00000609399 999 ntBASIC17.89■□□□□ 0.45
PRKCAP17252 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.89■□□□□ 0.45
PRKCAP17252 AP000974.1-201ENST00000623909 2387 ntBASIC17.89■□□□□ 0.45
PRKCAP17252 AC138932.1-201ENST00000534164 6830 ntBASIC17.89■□□□□ 0.45
PRKCAP17252 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PRKCAP17252 AC020916.1-201ENST00000587762 1774 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms