Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCANP13611 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.12■□□□□ 0.81
VCANP13611 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.12■□□□□ 0.81
VCANP13611 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
VCANP13611 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.12■□□□□ 0.81
VCANP13611 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.12■□□□□ 0.81
VCANP13611 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.12■□□□□ 0.81
VCANP13611 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VCANP13611 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCANP13611 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.12■□□□□ 0.81
VCANP13611 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
VCANP13611 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
VCANP13611 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.11■□□□□ 0.81
VCANP13611 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
VCANP13611 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 ECEL1P1-201ENST00000373592 1742 ntBASIC20.11■□□□□ 0.81
VCANP13611 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.11■□□□□ 0.81
VCANP13611 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.11■□□□□ 0.81
VCANP13611 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
VCANP13611 AC010327.4-202ENST00000591484 748 ntBASIC20.11■□□□□ 0.81
VCANP13611 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.11■□□□□ 0.81
VCANP13611 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.11■□□□□ 0.81
VCANP13611 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.11■□□□□ 0.81
VCANP13611 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.11■□□□□ 0.81
VCANP13611 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 CYMP-203ENST00000474680 1263 ntBASIC20.11■□□□□ 0.81
VCANP13611 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
VCANP13611 IGHV3-22-201ENST00000520721 359 ntBASIC20.11■□□□□ 0.81
VCANP13611 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.11■□□□□ 0.81
VCANP13611 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCANP13611 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.1■□□□□ 0.81
VCANP13611 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCANP13611 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
VCANP13611 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
VCANP13611 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
VCANP13611 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VCANP13611 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCANP13611 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCANP13611 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCANP13611 FAM8A3P-201ENST00000427218 844 ntBASIC20.1■□□□□ 0.81
VCANP13611 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.1■□□□□ 0.81
VCANP13611 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
VCANP13611 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
VCANP13611 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.1■□□□□ 0.81
VCANP13611 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
VCANP13611 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.1■□□□□ 0.81
VCANP13611 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
VCANP13611 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.09■□□□□ 0.81
VCANP13611 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.09■□□□□ 0.81
VCANP13611 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.09■□□□□ 0.81
VCANP13611 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.09■□□□□ 0.81
VCANP13611 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.09■□□□□ 0.81
VCANP13611 AP001005.1-201ENST00000571755 1248 ntBASIC20.09■□□□□ 0.81
VCANP13611 AC131212.4-201ENST00000623606 975 ntBASIC20.09■□□□□ 0.81
VCANP13611 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.09■□□□□ 0.81
VCANP13611 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.09■□□□□ 0.81
VCANP13611 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 AKR1C7P-201ENST00000305623 895 ntBASIC20.09■□□□□ 0.81
VCANP13611 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.09■□□□□ 0.81
VCANP13611 RPL13AP23-201ENST00000480739 586 ntBASIC20.09■□□□□ 0.81
VCANP13611 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.09■□□□□ 0.81
VCANP13611 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.09■□□□□ 0.81
VCANP13611 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.09■□□□□ 0.81
VCANP13611 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.09■□□□□ 0.81
VCANP13611 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.09■□□□□ 0.81
VCANP13611 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.09■□□□□ 0.81
VCANP13611 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
VCANP13611 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VCANP13611 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.08■□□□□ 0.81
VCANP13611 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.08■□□□□ 0.81
VCANP13611 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VCANP13611 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
VCANP13611 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms