Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
KRT3P12035 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT3P12035 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT3P12035 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT3P12035 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT3P12035 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.42■□□□□ 0.86
KRT3P12035 AC006058.3-201ENST00000606217 1069 ntBASIC20.42■□□□□ 0.86
KRT3P12035 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT3P12035 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KRT3P12035 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KRT3P12035 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT3P12035 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRT3P12035 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.41■□□□□ 0.86
KRT3P12035 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KRT3P12035 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT3P12035 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KRT3P12035 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT3P12035 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
KRT3P12035 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.41■□□□□ 0.86
KRT3P12035 AL023875.1-201ENST00000640777 796 ntBASIC20.41■□□□□ 0.86
KRT3P12035 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT3P12035 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT3P12035 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
KRT3P12035 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.41■□□□□ 0.86
KRT3P12035 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KRT3P12035 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.41■□□□□ 0.86
KRT3P12035 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
KRT3P12035 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.41■□□□□ 0.86
KRT3P12035 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRT3P12035 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT3P12035 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT3P12035 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT3P12035 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT3P12035 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT3P12035 POU5F1P3-201ENST00000428824 1078 ntBASIC20.4■□□□□ 0.86
KRT3P12035 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
KRT3P12035 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT3P12035 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT3P12035 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT3P12035 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT3P12035 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.4■□□□□ 0.86
KRT3P12035 AC004264.1-201ENST00000608354 794 ntBASIC20.4■□□□□ 0.86
KRT3P12035 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT3P12035 AC073648.6-201ENST00000641589 218 ntBASIC20.4■□□□□ 0.86
KRT3P12035 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRT3P12035 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
KRT3P12035 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT3P12035 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.39■□□□□ 0.86
KRT3P12035 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
KRT3P12035 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KRT3P12035 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
KRT3P12035 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
KRT3P12035 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT3P12035 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.39■□□□□ 0.85
KRT3P12035 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
KRT3P12035 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT3P12035 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.39■□□□□ 0.85
KRT3P12035 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.39■□□□□ 0.85
KRT3P12035 RN7SL471P-201ENST00000580476 299 ntBASIC20.39■□□□□ 0.85
KRT3P12035 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
KRT3P12035 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRT3P12035 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
KRT3P12035 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT3P12035 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT3P12035 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT3P12035 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT3P12035 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRT3P12035 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KRT3P12035 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KRT3P12035 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
KRT3P12035 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
KRT3P12035 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRT3P12035 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
KRT3P12035 AC239809.2-201ENST00000415381 517 ntBASIC20.38■□□□□ 0.85
KRT3P12035 AC128676.1-201ENST00000454392 318 ntBASIC20.38■□□□□ 0.85
KRT3P12035 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.38■□□□□ 0.85
KRT3P12035 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.38■□□□□ 0.85
KRT3P12035 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms