Protein–RNA interactions for Protein: P11171

EPB41, Protein 4.1, humanhuman

Known RBP Predictions only

Length 864 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41P11171 TUBB8P6-201ENST00000436895 1288 ntBASIC21.26■□□□□ 0.99
EPB41P11171 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.26■□□□□ 0.99
EPB41P11171 KRT18P16-201ENST00000510337 1294 ntBASIC21.26■□□□□ 0.99
EPB41P11171 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
EPB41P11171 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.26■□□□□ 0.99
EPB41P11171 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EPB41P11171 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
EPB41P11171 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.26■□□□□ 0.99
EPB41P11171 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.25■□□□□ 0.99
EPB41P11171 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
EPB41P11171 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
EPB41P11171 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.25■□□□□ 0.99
EPB41P11171 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 ZNF815P-204ENST00000434898 1737 ntBASIC21.25■□□□□ 0.99
EPB41P11171 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.25■□□□□ 0.99
EPB41P11171 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.25■□□□□ 0.99
EPB41P11171 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.25■□□□□ 0.99
EPB41P11171 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.25■□□□□ 0.99
EPB41P11171 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
EPB41P11171 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.25■□□□□ 0.99
EPB41P11171 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.25■□□□□ 0.99
EPB41P11171 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
EPB41P11171 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.24■□□□□ 0.99
EPB41P11171 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
EPB41P11171 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
EPB41P11171 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.24■□□□□ 0.99
EPB41P11171 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.24■□□□□ 0.99
EPB41P11171 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.24■□□□□ 0.99
EPB41P11171 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.24■□□□□ 0.99
EPB41P11171 AC069544.1-201ENST00000609399 999 ntBASIC21.24■□□□□ 0.99
EPB41P11171 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.24■□□□□ 0.99
EPB41P11171 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.24■□□□□ 0.99
EPB41P11171 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
EPB41P11171 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
EPB41P11171 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.24■□□□□ 0.99
EPB41P11171 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.24■□□□□ 0.99
EPB41P11171 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
EPB41P11171 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
EPB41P11171 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.23■□□□□ 0.99
EPB41P11171 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
EPB41P11171 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
EPB41P11171 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPB41P11171 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPB41P11171 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
EPB41P11171 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPB41P11171 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPB41P11171 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.23■□□□□ 0.99
EPB41P11171 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
EPB41P11171 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.23■□□□□ 0.99
EPB41P11171 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.23■□□□□ 0.99
EPB41P11171 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPB41P11171 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.23■□□□□ 0.99
EPB41P11171 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
EPB41P11171 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
EPB41P11171 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.23■□□□□ 0.99
EPB41P11171 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.23■□□□□ 0.99
EPB41P11171 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.23■□□□□ 0.99
EPB41P11171 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPB41P11171 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPB41P11171 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPB41P11171 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
EPB41P11171 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.23■□□□□ 0.99
EPB41P11171 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
EPB41P11171 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
EPB41P11171 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
EPB41P11171 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
EPB41P11171 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPB41P11171 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPB41P11171 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
EPB41P11171 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
EPB41P11171 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPB41P11171 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPB41P11171 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
EPB41P11171 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms