Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.34■□□□□ 0.85
RARAP10276 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RARAP10276 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RARAP10276 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RARAP10276 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.34■□□□□ 0.85
RARAP10276 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RARAP10276 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RARAP10276 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RARAP10276 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RARAP10276 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.34■□□□□ 0.85
RARAP10276 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RARAP10276 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.34■□□□□ 0.85
RARAP10276 AC008403.3-201ENST00000598924 454 ntBASIC20.34■□□□□ 0.85
RARAP10276 AL121829.2-201ENST00000620908 328 ntBASIC20.34■□□□□ 0.85
RARAP10276 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RARAP10276 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RARAP10276 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RARAP10276 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
RARAP10276 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.34■□□□□ 0.85
RARAP10276 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RARAP10276 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RARAP10276 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RARAP10276 AP006587.1-201ENST00000534129 1502 ntBASIC20.33■□□□□ 0.85
RARAP10276 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
RARAP10276 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RARAP10276 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RARAP10276 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RARAP10276 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RARAP10276 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RARAP10276 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RARAP10276 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RARAP10276 RNA5SP413-201ENST00000516373 109 ntBASIC20.33■□□□□ 0.85
RARAP10276 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.33■□□□□ 0.85
RARAP10276 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
RARAP10276 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RARAP10276 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RARAP10276 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.33■□□□□ 0.84
RARAP10276 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RARAP10276 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RARAP10276 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.33■□□□□ 0.84
RARAP10276 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RARAP10276 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RARAP10276 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RARAP10276 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RARAP10276 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RARAP10276 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RARAP10276 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RARAP10276 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
RARAP10276 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.32■□□□□ 0.84
RARAP10276 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RARAP10276 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.32■□□□□ 0.84
RARAP10276 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
RARAP10276 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RARAP10276 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RARAP10276 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
RARAP10276 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.32■□□□□ 0.84
RARAP10276 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RARAP10276 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.32■□□□□ 0.84
RARAP10276 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.32■□□□□ 0.84
RARAP10276 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RARAP10276 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RARAP10276 LETM1P2-201ENST00000597330 2178 ntBASIC20.32■□□□□ 0.84
RARAP10276 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RARAP10276 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RARAP10276 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RARAP10276 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.31■□□□□ 0.84
RARAP10276 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.31■□□□□ 0.84
RARAP10276 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RARAP10276 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 POM121L13P-201ENST00000422362 380 ntBASIC20.31■□□□□ 0.84
RARAP10276 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RARAP10276 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
RARAP10276 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RARAP10276 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.3■□□□□ 0.84
RARAP10276 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARAP10276 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RARAP10276 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.3■□□□□ 0.84
RARAP10276 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.3■□□□□ 0.84
RARAP10276 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARAP10276 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RARAP10276 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.3■□□□□ 0.84
RARAP10276 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
RARAP10276 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.3■□□□□ 0.84
RARAP10276 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RARAP10276 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.3■□□□□ 0.84
RARAP10276 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.3■□□□□ 0.84
RARAP10276 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms