Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.73■■□□□ 1.07
TPM3P06753 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TPM3P06753 AC005837.3-201ENST00000612163 286 ntBASIC21.73■■□□□ 1.07
TPM3P06753 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TPM3P06753 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
TPM3P06753 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.73■■□□□ 1.07
TPM3P06753 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.73■■□□□ 1.07
TPM3P06753 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
TPM3P06753 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TPM3P06753 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
TPM3P06753 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM3P06753 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.72■■□□□ 1.07
TPM3P06753 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.72■■□□□ 1.07
TPM3P06753 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.72■■□□□ 1.07
TPM3P06753 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.72■■□□□ 1.07
TPM3P06753 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 TERF1P5-201ENST00000477545 1207 ntBASIC21.72■■□□□ 1.07
TPM3P06753 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.72■■□□□ 1.07
TPM3P06753 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.72■■□□□ 1.07
TPM3P06753 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 AL161938.1-201ENST00000569833 2180 ntBASIC21.72■■□□□ 1.07
TPM3P06753 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TPM3P06753 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.72■■□□□ 1.07
TPM3P06753 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TPM3P06753 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM3P06753 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
TPM3P06753 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TPM3P06753 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.71■■□□□ 1.07
TPM3P06753 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TPM3P06753 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.71■■□□□ 1.07
TPM3P06753 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.71■■□□□ 1.07
TPM3P06753 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.71■■□□□ 1.07
TPM3P06753 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.71■■□□□ 1.07
TPM3P06753 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.71■■□□□ 1.07
TPM3P06753 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.71■■□□□ 1.07
TPM3P06753 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.71■■□□□ 1.07
TPM3P06753 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.71■■□□□ 1.07
TPM3P06753 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.71■■□□□ 1.07
TPM3P06753 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM3P06753 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21.71■■□□□ 1.07
TPM3P06753 AP000997.3-201ENST00000623333 2250 ntBASIC21.71■■□□□ 1.07
TPM3P06753 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
TPM3P06753 BICD1-207ENST00000551848 1962 ntBASIC21.7■■□□□ 1.07
TPM3P06753 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM3P06753 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.7■■□□□ 1.06
TPM3P06753 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TPM3P06753 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM3P06753 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
TPM3P06753 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM3P06753 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM3P06753 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
TPM3P06753 NOC2LP1-202ENST00000452600 2235 ntBASIC21.7■■□□□ 1.06
TPM3P06753 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TPM3P06753 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM3P06753 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM3P06753 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.69■■□□□ 1.06
TPM3P06753 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TPM3P06753 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TPM3P06753 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.69■■□□□ 1.06
TPM3P06753 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TPM3P06753 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM3P06753 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.69■■□□□ 1.06
TPM3P06753 AC018470.1-201ENST00000624790 3129 ntBASIC21.69■■□□□ 1.06
TPM3P06753 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM3P06753 PHGDH-210ENST00000641115 1638 ntBASIC21.69■■□□□ 1.06
TPM3P06753 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TPM3P06753 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TPM3P06753 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TPM3P06753 AL354751.1-201ENST00000412768 1863 ntBASIC21.69■■□□□ 1.06
TPM3P06753 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.68■■□□□ 1.06
TPM3P06753 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.68■■□□□ 1.06
TPM3P06753 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.68■■□□□ 1.06
TPM3P06753 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TPM3P06753 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms