Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNA1P02708 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRNA1P02708 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNA1P02708 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRNA1P02708 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.12■□□□□ 0.97
CHRNA1P02708 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNA1P02708 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.12■□□□□ 0.97
CHRNA1P02708 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.12■□□□□ 0.97
CHRNA1P02708 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNA1P02708 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHRNA1P02708 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRNA1P02708 GABARAPL3-202ENST00000624044 1851 ntBASIC21.11■□□□□ 0.97
CHRNA1P02708 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHRNA1P02708 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRNA1P02708 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.11■□□□□ 0.97
CHRNA1P02708 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 AC092647.4-201ENST00000457211 535 ntBASIC21.11■□□□□ 0.97
CHRNA1P02708 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.11■□□□□ 0.97
CHRNA1P02708 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 AL441883.1-201ENST00000566170 1045 ntBASIC21.11■□□□□ 0.97
CHRNA1P02708 AL512604.3-201ENST00000569583 964 ntBASIC21.11■□□□□ 0.97
CHRNA1P02708 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.11■□□□□ 0.97
CHRNA1P02708 AL023973.1-201ENST00000624619 620 ntBASIC21.11■□□□□ 0.97
CHRNA1P02708 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHRNA1P02708 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CHRNA1P02708 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 KRT8P45-201ENST00000414328 1447 ntBASIC21.11■□□□□ 0.97
CHRNA1P02708 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHRNA1P02708 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.11■□□□□ 0.97
CHRNA1P02708 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
CHRNA1P02708 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA1P02708 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.11■□□□□ 0.97
CHRNA1P02708 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA1P02708 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA1P02708 AC092667.1-201ENST00000434301 2586 ntBASIC21.1■□□□□ 0.97
CHRNA1P02708 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA1P02708 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA1P02708 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA1P02708 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRNA1P02708 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA1P02708 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRNA1P02708 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRNA1P02708 AL031432.5-201ENST00000641059 760 ntBASIC21.1■□□□□ 0.97
CHRNA1P02708 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA1P02708 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHRNA1P02708 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA1P02708 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CHRNA1P02708 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.1■□□□□ 0.97
CHRNA1P02708 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHRNA1P02708 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA1P02708 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA1P02708 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA1P02708 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA1P02708 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CHRNA1P02708 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHRNA1P02708 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA1P02708 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA1P02708 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA1P02708 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.09■□□□□ 0.97
CHRNA1P02708 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA1P02708 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA1P02708 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.09■□□□□ 0.97
CHRNA1P02708 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CHRNA1P02708 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA1P02708 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA1P02708 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA1P02708 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRNA1P02708 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.08■□□□□ 0.97
CHRNA1P02708 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRNA1P02708 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRNA1P02708 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CHRNA1P02708 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CHRNA1P02708 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA1P02708 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRNA1P02708 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.08■□□□□ 0.97
CHRNA1P02708 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA1P02708 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA1P02708 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA1P02708 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.08■□□□□ 0.97
CHRNA1P02708 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.08■□□□□ 0.97
CHRNA1P02708 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.08■□□□□ 0.97
CHRNA1P02708 AC140113.3-201ENST00000605663 199 ntBASIC21.08■□□□□ 0.97
CHRNA1P02708 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.08■□□□□ 0.96
CHRNA1P02708 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CHRNA1P02708 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHRNA1P02708 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.08■□□□□ 0.96
CHRNA1P02708 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CHRNA1P02708 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.08■□□□□ 0.96
CHRNA1P02708 AC099778.1-201ENST00000568593 1911 ntBASIC21.08■□□□□ 0.96
CHRNA1P02708 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA1P02708 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CHRNA1P02708 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms