Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
VAPBO95292 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.48■□□□□ 0.71
VAPBO95292 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPBO95292 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPBO95292 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPBO95292 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
VAPBO95292 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPBO95292 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.48■□□□□ 0.71
VAPBO95292 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAPBO95292 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
VAPBO95292 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
VAPBO95292 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
VAPBO95292 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.47■□□□□ 0.71
VAPBO95292 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAPBO95292 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VAPBO95292 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAPBO95292 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.47■□□□□ 0.71
VAPBO95292 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
VAPBO95292 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
VAPBO95292 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.47■□□□□ 0.71
VAPBO95292 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.47■□□□□ 0.71
VAPBO95292 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VAPBO95292 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.47■□□□□ 0.71
VAPBO95292 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VAPBO95292 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.47■□□□□ 0.71
VAPBO95292 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VAPBO95292 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
VAPBO95292 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAPBO95292 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.46■□□□□ 0.71
VAPBO95292 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
VAPBO95292 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPBO95292 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPBO95292 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VAPBO95292 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VAPBO95292 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPBO95292 KRT8P8-201ENST00000434750 1448 ntBASIC19.46■□□□□ 0.71
VAPBO95292 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.46■□□□□ 0.71
VAPBO95292 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPBO95292 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPBO95292 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.46■□□□□ 0.71
VAPBO95292 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VAPBO95292 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.46■□□□□ 0.71
VAPBO95292 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPBO95292 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPBO95292 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.46■□□□□ 0.71
VAPBO95292 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.46■□□□□ 0.71
VAPBO95292 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
VAPBO95292 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.46■□□□□ 0.71
VAPBO95292 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAPBO95292 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
VAPBO95292 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.45■□□□□ 0.7
VAPBO95292 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.45■□□□□ 0.7
VAPBO95292 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VAPBO95292 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.45■□□□□ 0.7
VAPBO95292 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VAPBO95292 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
VAPBO95292 POM121L13P-201ENST00000422362 380 ntBASIC19.45■□□□□ 0.7
VAPBO95292 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.45■□□□□ 0.7
VAPBO95292 RNA5SP413-201ENST00000516373 109 ntBASIC19.45■□□□□ 0.7
VAPBO95292 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAPBO95292 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.45■□□□□ 0.7
VAPBO95292 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.45■□□□□ 0.7
VAPBO95292 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.45■□□□□ 0.7
VAPBO95292 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.44■□□□□ 0.7
VAPBO95292 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
VAPBO95292 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VAPBO95292 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 TNXA-203ENST00000507684 2038 ntBASIC19.44■□□□□ 0.7
VAPBO95292 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VAPBO95292 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.44■□□□□ 0.7
VAPBO95292 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.44■□□□□ 0.7
VAPBO95292 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.44■□□□□ 0.7
VAPBO95292 KRT18P16-201ENST00000510337 1294 ntBASIC19.44■□□□□ 0.7
VAPBO95292 AC008403.3-201ENST00000598924 454 ntBASIC19.44■□□□□ 0.7
VAPBO95292 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAPBO95292 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms