Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NKX2-2O95096 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.91■□□□□ 0.46
NKX2-2O95096 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX2-2O95096 RPPH1-201ENST00000516869 333 ntBASIC17.91■□□□□ 0.46
NKX2-2O95096 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.91■□□□□ 0.46
NKX2-2O95096 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.91■□□□□ 0.46
NKX2-2O95096 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NKX2-2O95096 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.91■□□□□ 0.46
NKX2-2O95096 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-2O95096 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.91■□□□□ 0.46
NKX2-2O95096 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.91■□□□□ 0.46
NKX2-2O95096 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NKX2-2O95096 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-2O95096 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-2O95096 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-2O95096 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-2O95096 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-2O95096 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX2-2O95096 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.9■□□□□ 0.46
NKX2-2O95096 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-2O95096 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NKX2-2O95096 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NKX2-2O95096 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.9■□□□□ 0.46
NKX2-2O95096 KRT18P29-201ENST00000397031 1267 ntBASIC17.9■□□□□ 0.46
NKX2-2O95096 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.9■□□□□ 0.46
NKX2-2O95096 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NKX2-2O95096 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-2O95096 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NKX2-2O95096 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-2O95096 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.9■□□□□ 0.46
NKX2-2O95096 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.9■□□□□ 0.46
NKX2-2O95096 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-2O95096 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
NKX2-2O95096 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
NKX2-2O95096 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
NKX2-2O95096 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.9■□□□□ 0.46
NKX2-2O95096 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NKX2-2O95096 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NKX2-2O95096 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
NKX2-2O95096 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
NKX2-2O95096 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.89■□□□□ 0.45
NKX2-2O95096 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-2O95096 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-2O95096 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.89■□□□□ 0.45
NKX2-2O95096 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX2-2O95096 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-2O95096 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX2-2O95096 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
NKX2-2O95096 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.89■□□□□ 0.45
NKX2-2O95096 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.89■□□□□ 0.45
NKX2-2O95096 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-2O95096 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.89■□□□□ 0.45
NKX2-2O95096 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX2-2O95096 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.89■□□□□ 0.45
NKX2-2O95096 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-2O95096 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NKX2-2O95096 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-2O95096 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-2O95096 TEX21P-204ENST00000641479 1693 ntBASIC17.89■□□□□ 0.45
NKX2-2O95096 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.89■□□□□ 0.45
NKX2-2O95096 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.89■□□□□ 0.45
NKX2-2O95096 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
NKX2-2O95096 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-2O95096 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NKX2-2O95096 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-2O95096 AC141586.3-201ENST00000562166 1838 ntBASIC17.88■□□□□ 0.45
NKX2-2O95096 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-2O95096 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-2O95096 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NKX2-2O95096 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NKX2-2O95096 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-2O95096 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-2O95096 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-2O95096 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.88■□□□□ 0.45
NKX2-2O95096 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.88■□□□□ 0.45
NKX2-2O95096 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.88■□□□□ 0.45
NKX2-2O95096 AL359736.2-201ENST00000621992 437 ntBASIC17.88■□□□□ 0.45
NKX2-2O95096 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
NKX2-2O95096 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-2O95096 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-2O95096 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NKX2-2O95096 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-2O95096 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NKX2-2O95096 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX2-2O95096 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-2O95096 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-2O95096 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-2O95096 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
NKX2-2O95096 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-2O95096 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.87■□□□□ 0.45
NKX2-2O95096 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NKX2-2O95096 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms