Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SNRNP200O75643 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRNP200O75643 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.57■□□□□ 0.56
SNRNP200O75643 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNRNP200O75643 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.56■□□□□ 0.56
SNRNP200O75643 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SNRNP200O75643 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.56■□□□□ 0.56
SNRNP200O75643 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.56■□□□□ 0.56
SNRNP200O75643 KRT17P2-201ENST00000300992 1314 ntBASIC18.56■□□□□ 0.56
SNRNP200O75643 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
SNRNP200O75643 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.56■□□□□ 0.56
SNRNP200O75643 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRNP200O75643 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRNP200O75643 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRNP200O75643 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRNP200O75643 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRNP200O75643 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRNP200O75643 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.56■□□□□ 0.56
SNRNP200O75643 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNRNP200O75643 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SNRNP200O75643 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRNP200O75643 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRNP200O75643 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.56■□□□□ 0.56
SNRNP200O75643 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SNRNP200O75643 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRNP200O75643 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP200O75643 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRNP200O75643 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.55■□□□□ 0.56
SNRNP200O75643 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP200O75643 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.55■□□□□ 0.56
SNRNP200O75643 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRNP200O75643 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRNP200O75643 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP200O75643 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP200O75643 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP200O75643 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRNP200O75643 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SNRNP200O75643 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP200O75643 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.55■□□□□ 0.56
SNRNP200O75643 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRNP200O75643 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP200O75643 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRNP200O75643 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.55■□□□□ 0.56
SNRNP200O75643 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.55■□□□□ 0.56
SNRNP200O75643 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.55■□□□□ 0.56
SNRNP200O75643 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP200O75643 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP200O75643 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRNP200O75643 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRNP200O75643 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP200O75643 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SNRNP200O75643 AC007952.6-201ENST00000573168 2673 ntBASIC18.54■□□□□ 0.56
SNRNP200O75643 AC003957.1-201ENST00000625108 2673 ntBASIC18.54■□□□□ 0.56
SNRNP200O75643 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP200O75643 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP200O75643 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRNP200O75643 AC004951.3-201ENST00000418645 1148 ntBASIC18.54■□□□□ 0.56
SNRNP200O75643 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRNP200O75643 AL160286.2-201ENST00000567150 934 ntBASIC18.54■□□□□ 0.56
SNRNP200O75643 AC091390.4-202ENST00000476426 537 ntBASIC18.53■□□□□ 0.56
SNRNP200O75643 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.53■□□□□ 0.56
SNRNP200O75643 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SNRNP200O75643 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SNRNP200O75643 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP200O75643 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP200O75643 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP200O75643 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SNRNP200O75643 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SNRNP200O75643 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SNRNP200O75643 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.53■□□□□ 0.56
SNRNP200O75643 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRNP200O75643 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms