Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT3O75175 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT3O75175 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT3O75175 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CNOT3O75175 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.77■□□□□ 0.6
CNOT3O75175 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT3O75175 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.77■□□□□ 0.6
CNOT3O75175 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.77■□□□□ 0.59
CNOT3O75175 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CNOT3O75175 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNOT3O75175 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CNOT3O75175 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.77■□□□□ 0.59
CNOT3O75175 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 DPP3P2-201ENST00000416030 1696 ntBASIC18.76■□□□□ 0.59
CNOT3O75175 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.76■□□□□ 0.59
CNOT3O75175 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.76■□□□□ 0.59
CNOT3O75175 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.76■□□□□ 0.59
CNOT3O75175 PRKY-204ENST00000533551 1019 ntBASIC18.76■□□□□ 0.59
CNOT3O75175 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.76■□□□□ 0.59
CNOT3O75175 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.76■□□□□ 0.59
CNOT3O75175 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CNOT3O75175 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CNOT3O75175 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.76■□□□□ 0.59
CNOT3O75175 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CNOT3O75175 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT3O75175 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT3O75175 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 KRT8P20-201ENST00000423953 1409 ntBASIC18.75■□□□□ 0.59
CNOT3O75175 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT3O75175 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT3O75175 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.75■□□□□ 0.59
CNOT3O75175 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.75■□□□□ 0.59
CNOT3O75175 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT3O75175 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT3O75175 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.75■□□□□ 0.59
CNOT3O75175 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CNOT3O75175 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.75■□□□□ 0.59
CNOT3O75175 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.75■□□□□ 0.59
CNOT3O75175 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CNOT3O75175 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CNOT3O75175 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT3O75175 KRT8P17-201ENST00000453110 1448 ntBASIC18.74■□□□□ 0.59
CNOT3O75175 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT3O75175 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT3O75175 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT3O75175 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CNOT3O75175 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT3O75175 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT3O75175 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CNOT3O75175 HLA-G-202ENST00000376815 851 ntBASIC18.74■□□□□ 0.59
CNOT3O75175 HLA-G-203ENST00000376818 1127 ntBASIC18.74■□□□□ 0.59
CNOT3O75175 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CNOT3O75175 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNOT3O75175 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT3O75175 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT3O75175 TSPY7P-201ENST00000431358 1114 ntBASIC18.74■□□□□ 0.59
CNOT3O75175 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT3O75175 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT3O75175 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CNOT3O75175 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.74■□□□□ 0.59
CNOT3O75175 AL049637.2-201ENST00000641778 930 ntBASIC18.74■□□□□ 0.59
CNOT3O75175 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CNOT3O75175 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT3O75175 AC112907.3-201ENST00000577781 2400 ntBASIC18.74■□□□□ 0.59
CNOT3O75175 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT3O75175 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT3O75175 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT3O75175 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CNOT3O75175 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.74■□□□□ 0.59
CNOT3O75175 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.74■□□□□ 0.59
CNOT3O75175 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CNOT3O75175 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms