Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM13O60858 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM13O60858 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM13O60858 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM13O60858 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM13O60858 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM13O60858 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM13O60858 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM13O60858 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRIM13O60858 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM13O60858 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM13O60858 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM13O60858 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM13O60858 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM13O60858 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM13O60858 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRIM13O60858 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
TRIM13O60858 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM13O60858 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.07■□□□□ 0.64
TRIM13O60858 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.07■□□□□ 0.64
TRIM13O60858 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM13O60858 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM13O60858 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TRIM13O60858 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM13O60858 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
TRIM13O60858 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM13O60858 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRIM13O60858 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM13O60858 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM13O60858 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM13O60858 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM13O60858 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
TRIM13O60858 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM13O60858 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRIM13O60858 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM13O60858 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TRIM13O60858 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM13O60858 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM13O60858 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM13O60858 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM13O60858 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRIM13O60858 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM13O60858 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRIM13O60858 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM13O60858 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM13O60858 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM13O60858 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM13O60858 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
TRIM13O60858 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRIM13O60858 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TRIM13O60858 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM13O60858 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM13O60858 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRIM13O60858 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRIM13O60858 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM13O60858 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRIM13O60858 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
TRIM13O60858 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM13O60858 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.04■□□□□ 0.64
TRIM13O60858 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRIM13O60858 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 AC005181.1-201ENST00000604782 1256 ntBASIC19.04■□□□□ 0.64
TRIM13O60858 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
TRIM13O60858 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRIM13O60858 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms