Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.71■□□□□ 0.75
PRAMEF11O60813 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PRAMEF11O60813 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PRAMEF11O60813 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PRAMEF11O60813 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.71■□□□□ 0.75
PRAMEF11O60813 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
PRAMEF11O60813 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEF11O60813 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEF11O60813 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.7■□□□□ 0.74
PRAMEF11O60813 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PRAMEF11O60813 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.7■□□□□ 0.74
PRAMEF11O60813 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.7■□□□□ 0.74
PRAMEF11O60813 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.7■□□□□ 0.74
PRAMEF11O60813 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.7■□□□□ 0.74
PRAMEF11O60813 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
PRAMEF11O60813 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.7■□□□□ 0.74
PRAMEF11O60813 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PRAMEF11O60813 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PRAMEF11O60813 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
PRAMEF11O60813 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.69■□□□□ 0.74
PRAMEF11O60813 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEF11O60813 Z85996.1-201ENST00000494644 937 ntBASIC19.69■□□□□ 0.74
PRAMEF11O60813 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.69■□□□□ 0.74
PRAMEF11O60813 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 AC026271.3-201ENST00000571884 352 ntBASIC19.69■□□□□ 0.74
PRAMEF11O60813 AL031985.4-201ENST00000642138 673 ntBASIC19.69■□□□□ 0.74
PRAMEF11O60813 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PRAMEF11O60813 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PRAMEF11O60813 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PRAMEF11O60813 AC093484.2-201ENST00000580996 2166 ntBASIC19.68■□□□□ 0.74
PRAMEF11O60813 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF11O60813 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF11O60813 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF11O60813 SDHAP1-207ENST00000440850 2000 ntBASIC19.68■□□□□ 0.74
PRAMEF11O60813 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF11O60813 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF11O60813 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF11O60813 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF11O60813 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PRAMEF11O60813 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
PRAMEF11O60813 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAMEF11O60813 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.67■□□□□ 0.74
PRAMEF11O60813 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PRAMEF11O60813 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.67■□□□□ 0.74
PRAMEF11O60813 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.67■□□□□ 0.74
PRAMEF11O60813 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.67■□□□□ 0.74
PRAMEF11O60813 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PRAMEF11O60813 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PRAMEF11O60813 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PRAMEF11O60813 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms