Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX3O60493 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.11■□□□□ 0.65
SNX3O60493 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX3O60493 AP001160.3-201ENST00000601484 763 ntBASIC19.11■□□□□ 0.65
SNX3O60493 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX3O60493 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX3O60493 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX3O60493 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX3O60493 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
SNX3O60493 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SNX3O60493 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.11■□□□□ 0.65
SNX3O60493 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
SNX3O60493 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SNX3O60493 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX3O60493 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX3O60493 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX3O60493 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.1■□□□□ 0.65
SNX3O60493 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SNX3O60493 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX3O60493 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX3O60493 KRT18P20-201ENST00000548986 1279 ntBASIC19.1■□□□□ 0.65
SNX3O60493 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.1■□□□□ 0.65
SNX3O60493 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.1■□□□□ 0.65
SNX3O60493 AL136162.1-201ENST00000607711 1078 ntBASIC19.1■□□□□ 0.65
SNX3O60493 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.1■□□□□ 0.65
SNX3O60493 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.1■□□□□ 0.65
SNX3O60493 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX3O60493 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX3O60493 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX3O60493 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SNX3O60493 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX3O60493 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX3O60493 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
SNX3O60493 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNX3O60493 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.1■□□□□ 0.65
SNX3O60493 CYP21A1P-202ENST00000354927 1481 ntBASIC19.09■□□□□ 0.65
SNX3O60493 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.09■□□□□ 0.65
SNX3O60493 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.09■□□□□ 0.65
SNX3O60493 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX3O60493 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
SNX3O60493 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX3O60493 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SNX3O60493 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SNX3O60493 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.09■□□□□ 0.65
SNX3O60493 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX3O60493 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.09■□□□□ 0.65
SNX3O60493 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.09■□□□□ 0.65
SNX3O60493 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SNX3O60493 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
SNX3O60493 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.09■□□□□ 0.65
SNX3O60493 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.09■□□□□ 0.65
SNX3O60493 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SNX3O60493 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 AC012313.1-201ENST00000593393 3059 ntBASIC19.09■□□□□ 0.65
SNX3O60493 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
SNX3O60493 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNX3O60493 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
SNX3O60493 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNX3O60493 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SNX3O60493 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNX3O60493 AC135279.3-201ENST00000610945 1311 ntBASIC19.08■□□□□ 0.65
SNX3O60493 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX3O60493 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SNX3O60493 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX3O60493 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.08■□□□□ 0.64
SNX3O60493 AC104187.1-201ENST00000607510 612 ntBASIC19.08■□□□□ 0.64
SNX3O60493 AL035685.1-201ENST00000636663 812 ntBASIC19.08■□□□□ 0.64
SNX3O60493 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX3O60493 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX3O60493 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SNX3O60493 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX3O60493 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX3O60493 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SNX3O60493 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX3O60493 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNX3O60493 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SNX3O60493 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SNX3O60493 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.07■□□□□ 0.64
SNX3O60493 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
SNX3O60493 AC008764.6-201ENST00000595909 2069 ntBASIC19.07■□□□□ 0.64
SNX3O60493 IRX1P1-201ENST00000438849 1838 ntBASIC19.07■□□□□ 0.64
SNX3O60493 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNX3O60493 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms