Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 AL158211.5-201ENST00000623583 2518 ntBASIC17.49■□□□□ 0.39
ZIC3O60481 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.49■□□□□ 0.39
ZIC3O60481 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ZIC3O60481 RCC2P6-201ENST00000526625 1557 ntBASIC17.49■□□□□ 0.39
ZIC3O60481 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZIC3O60481 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ZIC3O60481 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ZIC3O60481 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ZIC3O60481 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ZIC3O60481 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.48■□□□□ 0.39
ZIC3O60481 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ZIC3O60481 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ZIC3O60481 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.48■□□□□ 0.39
ZIC3O60481 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 RBM17P1-201ENST00000453646 1190 ntBASIC17.48■□□□□ 0.39
ZIC3O60481 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.48■□□□□ 0.39
ZIC3O60481 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.48■□□□□ 0.39
ZIC3O60481 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.48■□□□□ 0.39
ZIC3O60481 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.48■□□□□ 0.39
ZIC3O60481 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.48■□□□□ 0.39
ZIC3O60481 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.48■□□□□ 0.39
ZIC3O60481 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.48■□□□□ 0.39
ZIC3O60481 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.48■□□□□ 0.39
ZIC3O60481 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.48■□□□□ 0.39
ZIC3O60481 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ZIC3O60481 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.48■□□□□ 0.39
ZIC3O60481 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.48■□□□□ 0.39
ZIC3O60481 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.48■□□□□ 0.39
ZIC3O60481 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.48■□□□□ 0.39
ZIC3O60481 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZIC3O60481 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ZIC3O60481 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.47■□□□□ 0.39
ZIC3O60481 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZIC3O60481 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ZIC3O60481 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZIC3O60481 AC004951.3-201ENST00000418645 1148 ntBASIC17.47■□□□□ 0.39
ZIC3O60481 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.47■□□□□ 0.39
ZIC3O60481 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.47■□□□□ 0.39
ZIC3O60481 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZIC3O60481 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.47■□□□□ 0.39
ZIC3O60481 BX088651.1-201ENST00000540551 451 ntBASIC17.47■□□□□ 0.39
ZIC3O60481 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ZIC3O60481 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZIC3O60481 AC079598.2-202ENST00000546624 1451 ntBASIC17.47■□□□□ 0.39
ZIC3O60481 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
ZIC3O60481 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
ZIC3O60481 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ZIC3O60481 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZIC3O60481 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ZIC3O60481 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZIC3O60481 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZIC3O60481 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZIC3O60481 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
ZIC3O60481 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
ZIC3O60481 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZIC3O60481 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.47■□□□□ 0.39
ZIC3O60481 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ZIC3O60481 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZIC3O60481 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.47■□□□□ 0.39
ZIC3O60481 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ZIC3O60481 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.46■□□□□ 0.39
ZIC3O60481 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZIC3O60481 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.46■□□□□ 0.39
ZIC3O60481 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ZIC3O60481 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.46■□□□□ 0.39
ZIC3O60481 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZIC3O60481 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZIC3O60481 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZIC3O60481 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZIC3O60481 UNC93B2-201ENST00000285383 730 ntBASIC17.46■□□□□ 0.39
ZIC3O60481 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ZIC3O60481 AC091390.4-202ENST00000476426 537 ntBASIC17.46■□□□□ 0.39
ZIC3O60481 AC011298.2-201ENST00000617989 482 ntBASIC17.46■□□□□ 0.39
ZIC3O60481 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZIC3O60481 KRT8P41-201ENST00000533985 1514 ntBASIC17.46■□□□□ 0.39
ZIC3O60481 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ZIC3O60481 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZIC3O60481 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZIC3O60481 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZIC3O60481 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZIC3O60481 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ZIC3O60481 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ZIC3O60481 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.45■□□□□ 0.38
ZIC3O60481 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ZIC3O60481 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.45■□□□□ 0.38
ZIC3O60481 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms