Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.53■□□□□ 0.4
SSX4O60224 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SSX4O60224 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSX4O60224 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.53■□□□□ 0.4
SSX4O60224 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SSX4O60224 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.53■□□□□ 0.4
SSX4O60224 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.53■□□□□ 0.4
SSX4O60224 AC026366.1-201ENST00000488803 879 ntBASIC17.53■□□□□ 0.4
SSX4O60224 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SSX4O60224 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
SSX4O60224 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.53■□□□□ 0.4
SSX4O60224 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.53■□□□□ 0.4
SSX4O60224 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.53■□□□□ 0.4
SSX4O60224 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SSX4O60224 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SSX4O60224 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SSX4O60224 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SSX4O60224 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SSX4O60224 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX4O60224 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
SSX4O60224 AC009113.1-201ENST00000570267 2443 ntBASIC17.52■□□□□ 0.4
SSX4O60224 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX4O60224 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX4O60224 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.52■□□□□ 0.4
SSX4O60224 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.52■□□□□ 0.4
SSX4O60224 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.52■□□□□ 0.4
SSX4O60224 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.52■□□□□ 0.4
SSX4O60224 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSX4O60224 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSX4O60224 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.52■□□□□ 0.4
SSX4O60224 GCSHP5-201ENST00000443090 522 ntBASIC17.52■□□□□ 0.4
SSX4O60224 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.52■□□□□ 0.4
SSX4O60224 UNC93B5-201ENST00000530315 699 ntBASIC17.52■□□□□ 0.4
SSX4O60224 CYP2T3P-201ENST00000601990 817 ntBASIC17.52■□□□□ 0.4
SSX4O60224 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.52■□□□□ 0.4
SSX4O60224 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.52■□□□□ 0.4
SSX4O60224 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.52■□□□□ 0.4
SSX4O60224 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.52■□□□□ 0.4
SSX4O60224 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SSX4O60224 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSX4O60224 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.52■□□□□ 0.39
SSX4O60224 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.52■□□□□ 0.39
SSX4O60224 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSX4O60224 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSX4O60224 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
SSX4O60224 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSX4O60224 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.51■□□□□ 0.39
SSX4O60224 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.51■□□□□ 0.39
SSX4O60224 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SSX4O60224 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 AP003097.1-201ENST00000530657 1135 ntBASIC17.51■□□□□ 0.39
SSX4O60224 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.51■□□□□ 0.39
SSX4O60224 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
SSX4O60224 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.51■□□□□ 0.39
SSX4O60224 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SSX4O60224 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSX4O60224 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SSX4O60224 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.5■□□□□ 0.39
SSX4O60224 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 AC012313.1-201ENST00000593393 3059 ntBASIC17.5■□□□□ 0.39
SSX4O60224 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SSX4O60224 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.5■□□□□ 0.39
SSX4O60224 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.5■□□□□ 0.39
SSX4O60224 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.5■□□□□ 0.39
SSX4O60224 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SSX4O60224 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.5■□□□□ 0.39
SSX4O60224 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.5■□□□□ 0.39
SSX4O60224 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.5■□□□□ 0.39
SSX4O60224 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 AC020916.1-201ENST00000587762 1774 ntBASIC17.5■□□□□ 0.39
SSX4O60224 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SSX4O60224 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SSX4O60224 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSX4O60224 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms