Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 KRT16P5-201ENST00000455284 522 ntBASIC17.28■□□□□ 0.36
TRAF3IP2O43734 C1QBPP2-201ENST00000528754 825 ntBASIC17.28■□□□□ 0.36
TRAF3IP2O43734 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 AC110285.5-201ENST00000611501 352 ntBASIC17.28■□□□□ 0.36
TRAF3IP2O43734 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAF3IP2O43734 AL032819.2-201ENST00000624543 2162 ntBASIC17.28■□□□□ 0.36
TRAF3IP2O43734 AC104417.2-201ENST00000562989 1793 ntBASIC17.28■□□□□ 0.36
TRAF3IP2O43734 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 KRT18P29-201ENST00000397031 1267 ntBASIC17.27■□□□□ 0.36
TRAF3IP2O43734 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAF3IP2O43734 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TRAF3IP2O43734 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
TRAF3IP2O43734 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRAF3IP2O43734 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 PRORSD1P-201ENST00000295112 541 ntBASIC17.26■□□□□ 0.35
TRAF3IP2O43734 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 RPPH1-201ENST00000516869 333 ntBASIC17.26■□□□□ 0.35
TRAF3IP2O43734 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAF3IP2O43734 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 ABHD17AP1-201ENST00000358206 933 ntBASIC17.25■□□□□ 0.35
TRAF3IP2O43734 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAF3IP2O43734 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms