Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
ACTN4O43707 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACTN4O43707 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ACTN4O43707 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ACTN4O43707 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.76■■□□□ 1.07
ACTN4O43707 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ACTN4O43707 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.76■■□□□ 1.07
ACTN4O43707 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTN4O43707 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ACTN4O43707 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.75■■□□□ 1.07
ACTN4O43707 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTN4O43707 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
ACTN4O43707 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ACTN4O43707 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.75■■□□□ 1.07
ACTN4O43707 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTN4O43707 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ACTN4O43707 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTN4O43707 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ACTN4O43707 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ACTN4O43707 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTN4O43707 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.75■■□□□ 1.07
ACTN4O43707 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ACTN4O43707 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ACTN4O43707 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ACTN4O43707 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.75■■□□□ 1.07
ACTN4O43707 UNC93B4-201ENST00000505679 747 ntBASIC21.75■■□□□ 1.07
ACTN4O43707 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ACTN4O43707 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
ACTN4O43707 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
ACTN4O43707 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ACTN4O43707 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.75■■□□□ 1.07
ACTN4O43707 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ACTN4O43707 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ACTN4O43707 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.74■■□□□ 1.07
ACTN4O43707 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
ACTN4O43707 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ACTN4O43707 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACTN4O43707 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.74■■□□□ 1.07
ACTN4O43707 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ACTN4O43707 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ACTN4O43707 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ACTN4O43707 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACTN4O43707 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
ACTN4O43707 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.74■■□□□ 1.07
ACTN4O43707 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACTN4O43707 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
ACTN4O43707 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACTN4O43707 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.74■■□□□ 1.07
ACTN4O43707 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACTN4O43707 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ACTN4O43707 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ACTN4O43707 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.73■■□□□ 1.07
ACTN4O43707 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.73■■□□□ 1.07
ACTN4O43707 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACTN4O43707 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACTN4O43707 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ACTN4O43707 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ACTN4O43707 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ACTN4O43707 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACTN4O43707 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACTN4O43707 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ACTN4O43707 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
ACTN4O43707 HLA-L-209ENST00000420110 1011 ntBASIC21.73■■□□□ 1.07
ACTN4O43707 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.73■■□□□ 1.07
ACTN4O43707 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.73■■□□□ 1.07
ACTN4O43707 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ACTN4O43707 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.73■■□□□ 1.07
ACTN4O43707 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
ACTN4O43707 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.73■■□□□ 1.07
ACTN4O43707 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ACTN4O43707 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ACTN4O43707 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.73■■□□□ 1.07
ACTN4O43707 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.73■■□□□ 1.07
ACTN4O43707 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
ACTN4O43707 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.72■■□□□ 1.07
ACTN4O43707 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ACTN4O43707 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.72■■□□□ 1.07
ACTN4O43707 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.72■■□□□ 1.07
ACTN4O43707 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 AL355802.2-201ENST00000402069 882 ntBASIC21.72■■□□□ 1.07
ACTN4O43707 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.72■■□□□ 1.07
ACTN4O43707 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.72■■□□□ 1.07
ACTN4O43707 UNC93B5-201ENST00000530315 699 ntBASIC21.72■■□□□ 1.07
ACTN4O43707 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.72■■□□□ 1.07
ACTN4O43707 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.72■■□□□ 1.07
ACTN4O43707 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ACTN4O43707 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
ACTN4O43707 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ACTN4O43707 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms