Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC23.18■■□□□ 1.3
FOXN1O15353 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.18■■□□□ 1.3
FOXN1O15353 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 AC026271.3-201ENST00000571884 352 ntBASIC23.18■■□□□ 1.3
FOXN1O15353 MIR3652-201ENST00000579335 131 ntBASIC23.18■■□□□ 1.3
FOXN1O15353 AC008622.2-201ENST00000617006 1229 ntBASIC23.18■■□□□ 1.3
FOXN1O15353 BCL10-202ENST00000620248 774 ntTSL 5 BASIC23.18■■□□□ 1.3
FOXN1O15353 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
FOXN1O15353 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
FOXN1O15353 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
FOXN1O15353 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXN1O15353 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXN1O15353 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXN1O15353 AL121603.2-201ENST00000557373 2117 ntBASIC23.17■■□□□ 1.3
FOXN1O15353 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXN1O15353 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
FOXN1O15353 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC23.17■■□□□ 1.3
FOXN1O15353 PKD1P6-201ENST00000343738 4769 ntBASIC23.17■■□□□ 1.3
FOXN1O15353 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.17■■□□□ 1.3
FOXN1O15353 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
FOXN1O15353 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
FOXN1O15353 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXN1O15353 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXN1O15353 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXN1O15353 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.17■■□□□ 1.3
FOXN1O15353 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.17■■□□□ 1.3
FOXN1O15353 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXN1O15353 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
FOXN1O15353 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC23.17■■□□□ 1.3
FOXN1O15353 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.17■■□□□ 1.3
FOXN1O15353 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
FOXN1O15353 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
FOXN1O15353 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.17■■□□□ 1.3
FOXN1O15353 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
FOXN1O15353 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
FOXN1O15353 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.16■■□□□ 1.3
FOXN1O15353 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.16■■□□□ 1.3
FOXN1O15353 AC020907.5-201ENST00000624372 1936 ntBASIC23.16■■□□□ 1.3
FOXN1O15353 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC23.16■■□□□ 1.3
FOXN1O15353 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
FOXN1O15353 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXN1O15353 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXN1O15353 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC23.16■■□□□ 1.3
FOXN1O15353 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC23.16■■□□□ 1.3
FOXN1O15353 AC116562.4-202ENST00000641738 218 ntBASIC23.16■■□□□ 1.3
FOXN1O15353 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
FOXN1O15353 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXN1O15353 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
FOXN1O15353 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
FOXN1O15353 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXN1O15353 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.15■■□□□ 1.3
FOXN1O15353 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.15■■□□□ 1.3
FOXN1O15353 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.15■■□□□ 1.3
FOXN1O15353 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXN1O15353 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
FOXN1O15353 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXN1O15353 KRT18P38-201ENST00000449496 1282 ntBASIC23.15■■□□□ 1.3
FOXN1O15353 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.15■■□□□ 1.3
FOXN1O15353 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXN1O15353 AC092119.3-201ENST00000612618 583 ntBASIC23.15■■□□□ 1.3
FOXN1O15353 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXN1O15353 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
FOXN1O15353 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.15■■□□□ 1.3
FOXN1O15353 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
FOXN1O15353 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.14■■□□□ 1.3
FOXN1O15353 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
FOXN1O15353 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
FOXN1O15353 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
FOXN1O15353 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
FOXN1O15353 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXN1O15353 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXN1O15353 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXN1O15353 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXN1O15353 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
FOXN1O15353 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
FOXN1O15353 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
FOXN1O15353 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.14■■□□□ 1.29
FOXN1O15353 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.14■■□□□ 1.29
FOXN1O15353 AL031432.5-201ENST00000641059 760 ntBASIC23.14■■□□□ 1.29
FOXN1O15353 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC23.14■■□□□ 1.29
FOXN1O15353 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.14■■□□□ 1.29
FOXN1O15353 AL512408.1-201ENST00000569378 2000 ntBASIC23.14■■□□□ 1.29
FOXN1O15353 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.14■■□□□ 1.29
FOXN1O15353 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.14■■□□□ 1.29
FOXN1O15353 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
FOXN1O15353 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXN1O15353 AC112907.3-201ENST00000577781 2400 ntBASIC23.13■■□□□ 1.29
FOXN1O15353 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXN1O15353 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXN1O15353 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms