Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SPTLC1O15269 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 MMP23A-201ENST00000234610 1017 ntBASIC20.78■□□□□ 0.92
SPTLC1O15269 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.78■□□□□ 0.92
SPTLC1O15269 MIR1238-201ENST00000408483 83 ntBASIC20.78■□□□□ 0.92
SPTLC1O15269 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SPTLC1O15269 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
SPTLC1O15269 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.78■□□□□ 0.92
SPTLC1O15269 AC130371.2-201ENST00000619443 611 ntBASIC20.78■□□□□ 0.92
SPTLC1O15269 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SPTLC1O15269 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC1O15269 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SPTLC1O15269 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SPTLC1O15269 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC1O15269 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC1O15269 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC1O15269 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SPTLC1O15269 ARMC10P1-201ENST00000313754 855 ntBASIC20.77■□□□□ 0.92
SPTLC1O15269 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.77■□□□□ 0.92
SPTLC1O15269 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SPTLC1O15269 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.77■□□□□ 0.92
SPTLC1O15269 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC1O15269 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC1O15269 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC1O15269 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.77■□□□□ 0.92
SPTLC1O15269 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.77■□□□□ 0.92
SPTLC1O15269 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.77■□□□□ 0.92
SPTLC1O15269 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SPTLC1O15269 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.77■□□□□ 0.92
SPTLC1O15269 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC1O15269 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SPTLC1O15269 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SPTLC1O15269 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SPTLC1O15269 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.76■□□□□ 0.91
SPTLC1O15269 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SPTLC1O15269 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.76■□□□□ 0.91
SPTLC1O15269 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.76■□□□□ 0.91
SPTLC1O15269 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.76■□□□□ 0.91
SPTLC1O15269 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.76■□□□□ 0.91
SPTLC1O15269 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SPTLC1O15269 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SPTLC1O15269 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.76■□□□□ 0.91
SPTLC1O15269 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SPTLC1O15269 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.76■□□□□ 0.91
SPTLC1O15269 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.76■□□□□ 0.91
SPTLC1O15269 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SPTLC1O15269 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPTLC1O15269 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.75■□□□□ 0.91
SPTLC1O15269 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPTLC1O15269 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPTLC1O15269 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SPTLC1O15269 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.75■□□□□ 0.91
SPTLC1O15269 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.75■□□□□ 0.91
SPTLC1O15269 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SPTLC1O15269 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SPTLC1O15269 FITM1-202ENST00000559294 800 ntBASIC20.75■□□□□ 0.91
SPTLC1O15269 AL160286.2-201ENST00000567150 934 ntBASIC20.75■□□□□ 0.91
SPTLC1O15269 AL590326.2-201ENST00000625139 305 ntBASIC20.75■□□□□ 0.91
SPTLC1O15269 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SPTLC1O15269 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.75■□□□□ 0.91
SPTLC1O15269 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPTLC1O15269 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPTLC1O15269 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPTLC1O15269 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SPTLC1O15269 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SPTLC1O15269 CYP2D8P-201ENST00000433633 1490 ntBASIC20.75■□□□□ 0.91
SPTLC1O15269 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPTLC1O15269 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.74■□□□□ 0.91
SPTLC1O15269 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPTLC1O15269 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPTLC1O15269 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPTLC1O15269 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPTLC1O15269 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.74■□□□□ 0.91
SPTLC1O15269 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPTLC1O15269 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPTLC1O15269 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPTLC1O15269 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.74■□□□□ 0.91
SPTLC1O15269 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.74■□□□□ 0.91
SPTLC1O15269 AC091390.4-202ENST00000476426 537 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms