Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.42■□□□□ 0.54
PDLIM1O00151 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.42■□□□□ 0.54
PDLIM1O00151 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
PDLIM1O00151 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM1O00151 AC135050.7-201ENST00000624508 2218 ntBASIC18.42■□□□□ 0.54
PDLIM1O00151 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM1O00151 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PDLIM1O00151 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM1O00151 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM1O00151 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PDLIM1O00151 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PDLIM1O00151 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
PDLIM1O00151 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM1O00151 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM1O00151 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PDLIM1O00151 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PDLIM1O00151 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM1O00151 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM1O00151 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM1O00151 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM1O00151 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PDLIM1O00151 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.41■□□□□ 0.54
PDLIM1O00151 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM1O00151 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM1O00151 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PDLIM1O00151 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDLIM1O00151 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDLIM1O00151 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PDLIM1O00151 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 AC124067.4-201ENST00000519691 2379 ntBASIC18.4■□□□□ 0.54
PDLIM1O00151 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PDLIM1O00151 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.4■□□□□ 0.54
PDLIM1O00151 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.4■□□□□ 0.54
PDLIM1O00151 CNN2P6-201ENST00000439038 900 ntBASIC18.4■□□□□ 0.54
PDLIM1O00151 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PDLIM1O00151 AC090192.1-201ENST00000517740 490 ntBASIC18.4■□□□□ 0.54
PDLIM1O00151 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 AC243732.1-201ENST00000612648 864 ntBASIC18.4■□□□□ 0.54
PDLIM1O00151 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.4■□□□□ 0.54
PDLIM1O00151 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM1O00151 RBM17P2-201ENST00000616397 1405 ntBASIC18.4■□□□□ 0.54
PDLIM1O00151 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM1O00151 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.39■□□□□ 0.54
PDLIM1O00151 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDLIM1O00151 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PDLIM1O00151 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.54
PDLIM1O00151 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDLIM1O00151 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM1O00151 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM1O00151 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM1O00151 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.39■□□□□ 0.53
PDLIM1O00151 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.39■□□□□ 0.53
PDLIM1O00151 TERF1P5-201ENST00000477545 1207 ntBASIC18.39■□□□□ 0.53
PDLIM1O00151 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms