Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 AC091874.3-201ENST00000512672 1195 ntBASIC17.3■□□□□ 0.36
TVP23AA6NH52 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 AC093503.3-201ENST00000624917 2352 ntBASIC17.3■□□□□ 0.36
TVP23AA6NH52 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TVP23AA6NH52 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.3■□□□□ 0.36
TVP23AA6NH52 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TVP23AA6NH52 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TVP23AA6NH52 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TVP23AA6NH52 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TVP23AA6NH52 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 SLC29A4P1-201ENST00000398760 971 ntBASIC17.29■□□□□ 0.36
TVP23AA6NH52 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.29■□□□□ 0.36
TVP23AA6NH52 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.29■□□□□ 0.36
TVP23AA6NH52 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TVP23AA6NH52 AC092118.2-201ENST00000613495 667 ntBASIC17.29■□□□□ 0.36
TVP23AA6NH52 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TVP23AA6NH52 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.29■□□□□ 0.36
TVP23AA6NH52 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.29■□□□□ 0.36
TVP23AA6NH52 HCG11-201ENST00000411553 5696 ntBASIC17.29■□□□□ 0.36
TVP23AA6NH52 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TVP23AA6NH52 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.29■□□□□ 0.36
TVP23AA6NH52 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 AC073210.2-201ENST00000430369 194 ntBASIC17.28■□□□□ 0.36
TVP23AA6NH52 RPS2P52-201ENST00000469610 820 ntBASIC17.28■□□□□ 0.36
TVP23AA6NH52 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TVP23AA6NH52 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.28■□□□□ 0.36
TVP23AA6NH52 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TVP23AA6NH52 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TVP23AA6NH52 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TVP23AA6NH52 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.27■□□□□ 0.36
TVP23AA6NH52 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TVP23AA6NH52 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TVP23AA6NH52 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TVP23AA6NH52 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TVP23AA6NH52 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TVP23AA6NH52 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TVP23AA6NH52 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TVP23AA6NH52 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TVP23AA6NH52 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.27■□□□□ 0.36
TVP23AA6NH52 GUSBP6-202ENST00000438529 1198 ntBASIC17.27■□□□□ 0.36
TVP23AA6NH52 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms