Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 RARRES2P4-201ENST00000514074 484 ntBASIC16.55■□□□□ 0.24
TMEM235A6NFC5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 KRT18P68-201ENST00000392293 1000 ntBASIC16.54■□□□□ 0.24
TMEM235A6NFC5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.54■□□□□ 0.24
TMEM235A6NFC5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 AL390961.4-201ENST00000623958 2535 ntBASIC16.53■□□□□ 0.24
TMEM235A6NFC5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.53■□□□□ 0.24
TMEM235A6NFC5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 WIZP1-201ENST00000531444 2299 ntBASIC16.52■□□□□ 0.24
TMEM235A6NFC5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM235A6NFC5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms