Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
RCCD1A6NED2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 AC005332.8-201ENST00000622750 2735 ntBASIC20.63■□□□□ 0.89
RCCD1A6NED2 LETM1P2-201ENST00000597330 2178 ntBASIC20.63■□□□□ 0.89
RCCD1A6NED2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.63■□□□□ 0.89
RCCD1A6NED2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RCCD1A6NED2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RCCD1A6NED2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RCCD1A6NED2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.63■□□□□ 0.89
RCCD1A6NED2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RCCD1A6NED2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RCCD1A6NED2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
RCCD1A6NED2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.62■□□□□ 0.89
RCCD1A6NED2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RCCD1A6NED2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RCCD1A6NED2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RCCD1A6NED2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.62■□□□□ 0.89
RCCD1A6NED2 AC133552.2-202ENST00000575694 574 ntBASIC20.62■□□□□ 0.89
RCCD1A6NED2 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.62■□□□□ 0.89
RCCD1A6NED2 AC093525.10-201ENST00000625130 1569 ntBASIC20.62■□□□□ 0.89
RCCD1A6NED2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RCCD1A6NED2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.62■□□□□ 0.89
RCCD1A6NED2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.62■□□□□ 0.89
RCCD1A6NED2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RCCD1A6NED2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.62■□□□□ 0.89
RCCD1A6NED2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RCCD1A6NED2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.62■□□□□ 0.89
RCCD1A6NED2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.61■□□□□ 0.89
RCCD1A6NED2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 AC135050.7-201ENST00000624508 2218 ntBASIC20.61■□□□□ 0.89
RCCD1A6NED2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.61■□□□□ 0.89
RCCD1A6NED2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.61■□□□□ 0.89
RCCD1A6NED2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.61■□□□□ 0.89
RCCD1A6NED2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RCCD1A6NED2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RCCD1A6NED2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.6■□□□□ 0.89
RCCD1A6NED2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RCCD1A6NED2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.6■□□□□ 0.89
RCCD1A6NED2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
RCCD1A6NED2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RCCD1A6NED2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RCCD1A6NED2 AL512353.2-201ENST00000448759 1962 ntBASIC20.6■□□□□ 0.89
RCCD1A6NED2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RCCD1A6NED2 AL162430.1-201ENST00000480705 870 ntBASIC20.6■□□□□ 0.89
RCCD1A6NED2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RCCD1A6NED2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.6■□□□□ 0.89
RCCD1A6NED2 AC005829.2-201ENST00000571422 1056 ntBASIC20.6■□□□□ 0.89
RCCD1A6NED2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RCCD1A6NED2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.6■□□□□ 0.89
RCCD1A6NED2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RCCD1A6NED2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RCCD1A6NED2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RCCD1A6NED2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
RCCD1A6NED2 IRX1P1-201ENST00000438849 1838 ntBASIC20.6■□□□□ 0.89
RCCD1A6NED2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RCCD1A6NED2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RCCD1A6NED2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RCCD1A6NED2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RCCD1A6NED2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.59■□□□□ 0.89
RCCD1A6NED2 AC073210.2-201ENST00000430369 194 ntBASIC20.59■□□□□ 0.89
RCCD1A6NED2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.59■□□□□ 0.89
RCCD1A6NED2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.59■□□□□ 0.89
RCCD1A6NED2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RCCD1A6NED2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RCCD1A6NED2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RCCD1A6NED2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RCCD1A6NED2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RCCD1A6NED2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RCCD1A6NED2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RCCD1A6NED2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RCCD1A6NED2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.59■□□□□ 0.89
RCCD1A6NED2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
RCCD1A6NED2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
RCCD1A6NED2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RCCD1A6NED2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RCCD1A6NED2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RCCD1A6NED2 AC018470.1-201ENST00000624790 3129 ntBASIC20.58■□□□□ 0.89
RCCD1A6NED2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RCCD1A6NED2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RCCD1A6NED2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
RCCD1A6NED2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RCCD1A6NED2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RCCD1A6NED2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RCCD1A6NED2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.58■□□□□ 0.89
RCCD1A6NED2 AC090164.3-201ENST00000610780 2143 ntBASIC20.58■□□□□ 0.89
RCCD1A6NED2 MIR5787-201ENST00000611784 55 ntBASIC20.58■□□□□ 0.89
RCCD1A6NED2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RCCD1A6NED2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms