Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 AC007613.1-201ENST00000572811 2597 ntBASIC13.74□□□□□ -0.21
TRBV6-5A0A0K0K1A5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 FP475955.4-201ENST00000623131 1990 ntBASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 AC069236.1-201ENST00000604339 616 ntBASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 IRX1P1-201ENST00000438849 1838 ntBASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.73□□□□□ -0.21
TRBV6-5A0A0K0K1A5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 AL512353.2-201ENST00000448759 1962 ntBASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 AL354751.1-201ENST00000412768 1863 ntBASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRBV6-5A0A0K0K1A5 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV6-5A0A0K0K1A5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms