Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 PRSS44-201ENST00000515154 1146 ntBASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 AC091076.1-201ENST00000610741 619 ntBASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV17A0A0B4J275 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 AL691432.2-201ENST00000607222 2038 ntBASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 AP005212.1-201ENST00000581547 1997 ntBASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV17A0A0B4J275 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 AL512408.1-201ENST00000569378 2000 ntBASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 AC140113.3-201ENST00000605663 199 ntBASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV17A0A0B4J275 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 HOMER2P1-201ENST00000455653 964 ntBASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV17A0A0B4J275 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRAV17A0A0B4J275 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms