Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 RCN1P1-201ENST00000400413 996 ntBASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 FAM207BP-201ENST00000447172 505 ntBASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 AC092865.7-201ENST00000641832 219 ntBASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRAV10A0A0B4J240 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 AC113347.1-201ENST00000413321 391 ntBASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 LIN28AP1-201ENST00000429574 405 ntBASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 AL137013.1-201ENST00000432946 1228 ntBASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 EGLN1P1-201ENST00000531623 762 ntBASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 AP000692.2-201ENST00000608391 879 ntBASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 AC130371.2-201ENST00000619443 611 ntBASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 AC010947.1-201ENST00000623454 693 ntBASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRAV10A0A0B4J240 CYP2D8P-201ENST00000433633 1490 ntBASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 AL160286.2-201ENST00000567150 934 ntBASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRAV10A0A0B4J240 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 AC009237.14-201ENST00000609975 1594 ntBASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 AC073314.1-201ENST00000568729 2216 ntBASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 SLC25A3P1-201ENST00000443844 931 ntBASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 ATP5G1P1-201ENST00000448724 379 ntBASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 RN7SL850P-201ENST00000579959 291 ntBASIC13.66□□□□□ -0.22
TRAV10A0A0B4J240 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms