Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC187A0A096LP49 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 AC093458.2-201ENST00000623150 629 ntBASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC187A0A096LP49 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC187A0A096LP49 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 PRSS44-201ENST00000515154 1146 ntBASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 KRT8P41-201ENST00000533985 1514 ntBASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCDC187A0A096LP49 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 AC005332.1-201ENST00000577698 1310 ntBASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC187A0A096LP49 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms