Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 TFP1-202ENST00000475455 1573 ntBASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV30A0A087WSZ9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 SLC29A4P1-201ENST00000398760 971 ntBASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 MIPEPP3-201ENST00000412105 444 ntBASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 AC092437.1-201ENST00000624794 1048 ntBASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 AL032819.2-201ENST00000624543 2162 ntBASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV30A0A087WSZ9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 AC006970.2-201ENST00000450065 779 ntBASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 AC092118.2-201ENST00000613495 667 ntBASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 AL050303.2-201ENST00000619798 666 ntBASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV30A0A087WSZ9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV30A0A087WSZ9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
TRAV30A0A087WSZ9 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV30A0A087WSZ9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.21■□□□□ 0.02
TRAV30A0A087WSZ9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV30A0A087WSZ9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.02
TRAV30A0A087WSZ9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV30A0A087WSZ9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms