Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 RNU4-23P-201ENST00000362839 140 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 RNU1-130P-201ENST00000363930 160 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 RPS26P8-201ENST00000393490 348 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 RNU6-564P-201ENST00000410983 104 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 RPS6P12-201ENST00000432491 726 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AL606490.7-201ENST00000433136 191 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 CBX1P4-201ENST00000439415 457 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC133473.1-201ENST00000455173 299 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC105137.1-201ENST00000484355 562 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 PCNAP1-201ENST00000505363 709 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC025884.1-201ENST00000556034 378 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC020634.1-201ENST00000608701 549 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC055764.2-201ENST00000610089 670 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AC015726.3-201ENST00000624501 418 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 AL133243.3-201ENST00000617415 3004 ntBASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
TM9SF3Q9HD45 OR11H5P-202ENST00000641612 1325 ntBASIC4.46□□□□□ -1.69
TM9SF3Q9HD45 AP001002.1-201ENST00000625148 1513 ntBASIC4.46□□□□□ -1.69
TM9SF3Q9HD45 AC093311.1-201ENST00000506586 2021 ntBASIC4.46□□□□□ -1.69
TM9SF3Q9HD45 SAGE2P-201ENST00000420011 2126 ntBASIC4.46□□□□□ -1.69
TM9SF3Q9HD45 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
TM9SF3Q9HD45 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
TM9SF3Q9HD45 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC018529.3-201ENST00000624212 2254 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 RNF6P1-201ENST00000444889 1784 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 OR5P1P-201ENST00000299512 925 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 RNA5SP366-201ENST00000365454 123 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 RNU6-31P-201ENST00000384388 108 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AL603766.1-201ENST00000407763 664 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC105402.1-201ENST00000413336 545 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC122718.1-201ENST00000439448 744 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC114755.5-201ENST00000447760 831 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC010469.1-201ENST00000463864 576 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 FAM133DP-201ENST00000464802 691 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC053481.1-201ENST00000467217 306 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 RPL23AP65-201ENST00000475608 468 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC091167.1-201ENST00000492017 396 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 PPM1AP1-201ENST00000502740 1135 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 MIR2116-201ENST00000517221 80 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC135803.1-201ENST00000608748 565 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 CR392039.4-201ENST00000624968 501 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC006065.6-201ENST00000625201 545 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 MIR3653-201ENST00000625572 110 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 AC007529.1-201ENST00000418574 2178 ntBASIC4.46□□□□□ -1.7
TM9SF3Q9HD45 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TM9SF3Q9HD45 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms