Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF44Q7L0R7 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RNF44Q7L0R7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNF44Q7L0R7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF44Q7L0R7 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF44Q7L0R7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF44Q7L0R7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNF44Q7L0R7 PANDAR-201ENST00000629595 1506 ntBASIC5.01□□□□□ -1.61
RNF44Q7L0R7 AP000526.1-201ENST00000603308 1388 ntBASIC5.01□□□□□ -1.61
RNF44Q7L0R7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF44Q7L0R7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.01□□□□□ -1.61
RNF44Q7L0R7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.01□□□□□ -1.61
RNF44Q7L0R7 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
RNF44Q7L0R7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5□□□□□ -1.61
RNF44Q7L0R7 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5□□□□□ -1.61
RNF44Q7L0R7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 RNA5SP514-201ENST00000363717 111 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 RNU6-621P-201ENST00000364752 109 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 RNA5SP90-201ENST00000364801 99 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 Y_RNA.311-201ENST00000365068 96 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 MIR1182-201ENST00000408363 97 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 GPS2P1-201ENST00000411761 986 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5□□□□□ -1.61
RNF44Q7L0R7 AC090960.1-201ENST00000421072 306 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AC234781.2-201ENST00000426370 994 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 RPP40P1-201ENST00000426762 456 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 RPS27AP6-201ENST00000427962 448 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 HSPD1P12-201ENST00000429127 1069 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5□□□□□ -1.61
RNF44Q7L0R7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5□□□□□ -1.61
RNF44Q7L0R7 EEF1A1P1-201ENST00000447052 739 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AC239809.1-201ENST00000450470 217 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5□□□□□ -1.61
RNF44Q7L0R7 LINC00888-204ENST00000487386 421 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5□□□□□ -1.61
RNF44Q7L0R7 SNRPCP2-201ENST00000504370 475 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 RNA5SP228-201ENST00000516232 133 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5□□□□□ -1.61
RNF44Q7L0R7 OR5M2P-201ENST00000529003 936 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5□□□□□ -1.61
RNF44Q7L0R7 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 OR11J2P-201ENST00000555298 907 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 TRAV15-201ENST00000556680 249 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5□□□□□ -1.61
RNF44Q7L0R7 AC090888.1-201ENST00000561335 1141 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AC116553.2-201ENST00000564203 463 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5□□□□□ -1.61
RNF44Q7L0R7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5□□□□□ -1.61
RNF44Q7L0R7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 AC011626.1-201ENST00000604710 562 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AL592221.1-201ENST00000605266 382 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5□□□□□ -1.61
RNF44Q7L0R7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RNF44Q7L0R7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5□□□□□ -1.61
RNF44Q7L0R7 MIR6839-201ENST00000620425 113 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AC018445.2-201ENST00000622987 260 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AC026634.1-201ENST00000634369 198 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5□□□□□ -1.61
RNF44Q7L0R7 AC135068.12-201ENST00000637370 931 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5□□□□□ -1.61
RNF44Q7L0R7 AC006210.2-201ENST00000367074 1545 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5□□□□□ -1.61
RNF44Q7L0R7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5□□□□□ -1.61
RNF44Q7L0R7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RNF44Q7L0R7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5□□□□□ -1.61
RNF44Q7L0R7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RNF44Q7L0R7 AC107027.3-201ENST00000565095 3473 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 STX3-208ENST00000641815 3236 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5□□□□□ -1.61
RNF44Q7L0R7 PHKBP1-201ENST00000450951 1951 ntBASIC5□□□□□ -1.61
RNF44Q7L0R7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF44Q7L0R7 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 AC109780.1-201ENST00000451768 1344 ntBASIC4.99□□□□□ -1.61
RNF44Q7L0R7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 U8.4-201ENST00000363626 134 ntBASIC4.99□□□□□ -1.61
RNF44Q7L0R7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF44Q7L0R7 RNA5SP241-201ENST00000391326 114 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms