Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 HMGB1P19-201ENST00000517578 577 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 OR5AK1P-201ENST00000524837 922 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC079600.1-201ENST00000550326 297 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 ISCA1P3-201ENST00000577104 373 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC114878.2-201ENST00000604863 1251 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AL365181.4-201ENST00000609800 547 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC026422.1-201ENST00000623961 452 ntBASIC5.12□□□□□ -1.59
RNF220Q5VTB9 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
RNF220Q5VTB9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC011155.1-201ENST00000316512 456 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 RNU6-441P-201ENST00000384545 106 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 SNORD56.6-201ENST00000384569 71 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 VDAC2P1-201ENST00000399358 958 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 TPT1P2-201ENST00000413105 503 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC009518.2-201ENST00000418056 731 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 USP9YP26-201ENST00000421008 661 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC090960.1-201ENST00000421072 306 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 RPL36P19-201ENST00000430744 301 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 UBE2V1P1-201ENST00000430836 445 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC090018.1-201ENST00000434369 367 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 RNU7-125P-201ENST00000458760 62 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 RN7SL583P-201ENST00000475692 287 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 HMGB1P28-201ENST00000507778 552 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 HMGB1P44-201ENST00000508597 572 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 RNU6-615P-201ENST00000516065 106 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AP000790.1-201ENST00000528891 737 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC090888.1-201ENST00000561335 1141 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC090616.2-202ENST00000584248 222 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 SNORD39.3-201ENST00000584451 71 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 Z94722.1-201ENST00000604328 474 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 HSPE1P14-201ENST00000605812 302 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC006270.3-201ENST00000605967 1036 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 uc_338.7-201ENST00000621834 124 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC079248.2-201ENST00000623779 326 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AC007671.2-201ENST00000637344 619 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 AL390862.1-201ENST00000635467 1469 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 HSPA8P18-201ENST00000439846 1928 ntBASIC5.11□□□□□ -1.59
RNF220Q5VTB9 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF220Q5VTB9 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 OR52B3P-201ENST00000314715 928 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 RNU6-1200P-201ENST00000384162 107 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 HMGB1P20-201ENST00000402555 677 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 RN7SKP240-201ENST00000410583 375 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms