Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 AP000827.1-201ENST00000527814 258 ntBASIC4.61□□□□□ -1.67
RAB6CQ53S08 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAB6CQ53S08 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 AC234771.5-201ENST00000600161 514 ntBASIC4.61□□□□□ -1.67
RAB6CQ53S08 AL606834.3-201ENST00000602615 496 ntBASIC4.61□□□□□ -1.67
RAB6CQ53S08 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 AL354984.3-201ENST00000604803 325 ntBASIC4.61□□□□□ -1.67
RAB6CQ53S08 AC018754.1-201ENST00000607486 925 ntBASIC4.61□□□□□ -1.67
RAB6CQ53S08 AC091979.2-201ENST00000607514 214 ntBASIC4.61□□□□□ -1.67
RAB6CQ53S08 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 GTF2H2B-203ENST00000508065 1432 ntBASIC4.61□□□□□ -1.67
RAB6CQ53S08 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.61□□□□□ -1.67
RAB6CQ53S08 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 MAPK10-304ENST00000641341 3984 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 RNU5E-10P-201ENST00000363506 118 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 MTCO2P8-201ENST00000412213 658 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 RPL21P108-201ENST00000413857 481 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 DDX39BP2-208ENST00000453923 258 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 GTF2IP12-201ENST00000456547 356 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC053481.1-201ENST00000467217 306 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 OR5AK3P-201ENST00000527486 1297 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AL049838.1-201ENST00000563647 981 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 SLC25A36P1-201ENST00000590111 465 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 VN1R87P-201ENST00000596706 487 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AL121873.1-201ENST00000616013 524 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC007546.2-201ENST00000623996 360 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC125257.1-201ENST00000560400 2930 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 AC120338.1-201ENST00000625074 1541 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 ZNF849P-201ENST00000594711 1566 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 CCT8P1-201ENST00000413611 1657 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAB6CQ53S08 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
RAB6CQ53S08 OR56B2P-202ENST00000641377 2453 ntBASIC4.6□□□□□ -1.67
RAB6CQ53S08 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RAB6CQ53S08 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAB6CQ53S08 AC126755.2-208ENST00000327792 462 ntBASIC4.59□□□□□ -1.67
RAB6CQ53S08 AC138969.1-213ENST00000331436 462 ntBASIC4.59□□□□□ -1.67
RAB6CQ53S08 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RAB6CQ53S08 MIR331-201ENST00000362302 94 ntBASIC4.59□□□□□ -1.67
RAB6CQ53S08 SNORA62.2-201ENST00000364672 152 ntBASIC4.59□□□□□ -1.67
RAB6CQ53S08 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.59□□□□□ -1.67
RAB6CQ53S08 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
RAB6CQ53S08 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RAB6CQ53S08 RNU6-225P-201ENST00000384613 103 ntBASIC4.59□□□□□ -1.67
RAB6CQ53S08 SDHCP2-201ENST00000398565 501 ntBASIC4.59□□□□□ -1.67
RAB6CQ53S08 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RAB6CQ53S08 RPL7P27-201ENST00000403775 720 ntBASIC4.59□□□□□ -1.67
RAB6CQ53S08 ZNF602P-201ENST00000405929 924 ntBASIC4.59□□□□□ -1.67
RAB6CQ53S08 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.59□□□□□ -1.67
RAB6CQ53S08 NRBF2P2-201ENST00000413087 861 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms