Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC025554.1-201ENST00000505641 188 ntBASIC4.33□□□□□ -1.72
CDH6P55285 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.33□□□□□ -1.72
CDH6P55285 UBTFL9-201ENST00000534504 1148 ntBASIC4.33□□□□□ -1.72
CDH6P55285 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH6P55285 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH6P55285 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH6P55285 AC068020.1-201ENST00000594215 661 ntBASIC4.33□□□□□ -1.72
CDH6P55285 AL161729.3-201ENST00000603533 673 ntBASIC4.33□□□□□ -1.72
CDH6P55285 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH6P55285 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH6P55285 AC114781.5-201ENST00000615297 108 ntBASIC4.33□□□□□ -1.72
CDH6P55285 RPL23AP61-201ENST00000623642 466 ntBASIC4.33□□□□□ -1.72
CDH6P55285 AC011944.2-201ENST00000624440 683 ntBASIC4.33□□□□□ -1.72
CDH6P55285 AP000843.1-201ENST00000624880 701 ntBASIC4.33□□□□□ -1.72
CDH6P55285 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH6P55285 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH6P55285 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CDH6P55285 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH6P55285 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH6P55285 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH6P55285 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDH6P55285 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH6P55285 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH6P55285 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH6P55285 RNU6-618P-201ENST00000363518 112 ntBASIC4.32□□□□□ -1.72
CDH6P55285 AL450992.3-201ENST00000413192 568 ntBASIC4.32□□□□□ -1.72
CDH6P55285 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH6P55285 AL807761.1-201ENST00000417622 171 ntBASIC4.32□□□□□ -1.72
CDH6P55285 RWDD4P2-201ENST00000426392 563 ntBASIC4.32□□□□□ -1.72
CDH6P55285 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH6P55285 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH6P55285 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH6P55285 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDH6P55285 RNU6-1218P-201ENST00000458990 108 ntBASIC4.32□□□□□ -1.72
CDH6P55285 RPL5P13-201ENST00000462840 709 ntBASIC4.32□□□□□ -1.72
CDH6P55285 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH6P55285 RWDD4P1-201ENST00000488019 565 ntBASIC4.32□□□□□ -1.72
CDH6P55285 PRELID3BP7-201ENST00000503606 469 ntBASIC4.32□□□□□ -1.72
CDH6P55285 AC010627.1-201ENST00000503819 1294 ntBASIC4.32□□□□□ -1.72
CDH6P55285 ATG10-AS1-201ENST00000504846 648 ntBASIC4.32□□□□□ -1.72
CDH6P55285 VWA8P1-201ENST00000510889 176 ntBASIC4.32□□□□□ -1.72
CDH6P55285 RNA5SP154-201ENST00000516193 111 ntBASIC4.32□□□□□ -1.72
CDH6P55285 AC008676.3-201ENST00000521237 435 ntBASIC4.32□□□□□ -1.72
CDH6P55285 DEFB109D-201ENST00000529497 240 ntBASIC4.32□□□□□ -1.72
CDH6P55285 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH6P55285 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH6P55285 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH6P55285 HNRNPCP4-201ENST00000571636 900 ntBASIC4.32□□□□□ -1.72
CDH6P55285 AC022655.2-201ENST00000577280 318 ntBASIC4.32□□□□□ -1.72
CDH6P55285 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH6P55285 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH6P55285 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH6P55285 HMGB1P51-201ENST00000605166 638 ntBASIC4.32□□□□□ -1.72
CDH6P55285 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH6P55285 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH6P55285 AL049555.1-201ENST00000562834 1933 ntBASIC4.32□□□□□ -1.72
CDH6P55285 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH6P55285 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH6P55285 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH6P55285 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH6P55285 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
CDH6P55285 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CDH6P55285 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CDH6P55285 MTND4P26-201ENST00000415971 1359 ntBASIC4.31□□□□□ -1.72
CDH6P55285 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CDH6P55285 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH6P55285 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDH6P55285 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH6P55285 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH6P55285 RNU6-1279P-201ENST00000383917 103 ntBASIC4.31□□□□□ -1.72
CDH6P55285 SNORA37-201ENST00000384504 129 ntBASIC4.31□□□□□ -1.72
CDH6P55285 AL161909.1-201ENST00000397390 712 ntBASIC4.31□□□□□ -1.72
CDH6P55285 BTF3P9-201ENST00000418784 283 ntBASIC4.31□□□□□ -1.72
CDH6P55285 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH6P55285 AC048351.1-201ENST00000420064 602 ntBASIC4.31□□□□□ -1.72
CDH6P55285 SEC63P1-201ENST00000425785 1258 ntBASIC4.31□□□□□ -1.72
CDH6P55285 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH6P55285 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH6P55285 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH6P55285 EIF2S2P4-201ENST00000461070 984 ntBASIC4.31□□□□□ -1.72
CDH6P55285 AC108475.1-201ENST00000507880 950 ntBASIC4.31□□□□□ -1.72
CDH6P55285 AC106806.2-201ENST00000509365 500 ntBASIC4.31□□□□□ -1.72
CDH6P55285 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH6P55285 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH6P55285 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH6P55285 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDH6P55285 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH6P55285 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.31□□□□□ -1.72
CDH6P55285 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.31□□□□□ -1.72
CDH6P55285 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH6P55285 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH6P55285 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH6P55285 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.31□□□□□ -1.72
CDH6P55285 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH6P55285 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH6P55285 AC012603.1-201ENST00000606424 528 ntBASIC4.31□□□□□ -1.72
CDH6P55285 AL136295.6-201ENST00000610486 658 ntBASIC4.31□□□□□ -1.72
CDH6P55285 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.31□□□□□ -1.72
CDH6P55285 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH6P55285 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms