Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC067931.1-201ENST00000624190 671 ntBASIC4.39□□□□□ -1.71
HOXA9P31269 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXA9P31269 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXA9P31269 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXA9P31269 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HOXA9P31269 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA9P31269 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXA9P31269 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HOXA9P31269 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 SCN1A-220ENST00000641603 12506 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA9P31269 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HOXA9P31269 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HOXA9P31269 SNORA62.3-201ENST00000365110 153 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 MIR708-201ENST00000390708 88 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 TCEA1P4-201ENST00000415066 844 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 MTCO3P17-201ENST00000443775 513 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXA9P31269 CLIC4P1-201ENST00000453177 535 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 AL354710.1-201ENST00000453641 246 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA9P31269 AC090013.1-201ENST00000485147 480 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 AC146944.2-203ENST00000502493 354 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.38□□□□□ -1.71
HOXA9P31269 AC139495.1-202ENST00000513164 354 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXA9P31269 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA9P31269 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
HOXA9P31269 AC011270.1-201ENST00000558606 583 ntBASIC4.38□□□□□ -1.71
HOXA9P31269 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXA9P31269 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.38□□□□□ -1.71
HOXA9P31269 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.38□□□□□ -1.71
HOXA9P31269 RFC1-217ENST00000639695 867 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA9P31269 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HOXA9P31269 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.38□□□□□ -1.71
HOXA9P31269 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HOXA9P31269 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
HOXA9P31269 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HOXA9P31269 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA9P31269 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HOXA9P31269 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HOXA9P31269 Z82217.1-201ENST00000625157 8149 ntBASIC4.37□□□□□ -1.71
HOXA9P31269 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA9P31269 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA9P31269 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXA9P31269 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HOXA9P31269 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
HOXA9P31269 AL139039.2-201ENST00000407436 479 ntBASIC4.37□□□□□ -1.71
HOXA9P31269 RNU6ATAC-201ENST00000408749 126 ntBASIC4.37□□□□□ -1.71
HOXA9P31269 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXA9P31269 HPRT1P2-201ENST00000505250 544 ntBASIC4.37□□□□□ -1.71
HOXA9P31269 RNU1-45P-201ENST00000517191 141 ntBASIC4.37□□□□□ -1.71
HOXA9P31269 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.37□□□□□ -1.71
HOXA9P31269 VN1R81P-201ENST00000602085 372 ntBASIC4.37□□□□□ -1.71
HOXA9P31269 AC079298.2-201ENST00000623885 459 ntBASIC4.37□□□□□ -1.71
HOXA9P31269 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXA9P31269 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA9P31269 AC116667.1-201ENST00000604855 2072 ntBASIC4.37□□□□□ -1.71
HOXA9P31269 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXA9P31269 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.37□□□□□ -1.71
HOXA9P31269 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXA9P31269 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA9P31269 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA9P31269 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXA9P31269 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA9P31269 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
HOXA9P31269 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA9P31269 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HOXA9P31269 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
HOXA9P31269 SNORA60-201ENST00000362396 134 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXA9P31269 SNORD66.1-201ENST00000391230 76 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 PTMAP2-201ENST00000397627 327 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 RN7SKP167-201ENST00000411047 285 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 MTND2P2-201ENST00000434633 945 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 RAB9AP5-201ENST00000437794 597 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 RPS29P7-201ENST00000439662 171 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 RAB9AP2-201ENST00000443911 597 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 VN1R34P-201ENST00000447387 883 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 EIF2S2P5-201ENST00000457635 968 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 RPL7P1-201ENST00000468161 747 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 RPL7P9-201ENST00000468715 747 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 AC022034.3-201ENST00000471393 478 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXA9P31269 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXA9P31269 AF213884.1-201ENST00000488102 463 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXA9P31269 STMN1P2-201ENST00000508435 439 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 HMGB3P13-201ENST00000511263 607 ntBASIC4.36□□□□□ -1.71
HOXA9P31269 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms