Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LIG1P18858 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LIG1P18858 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.61□□□□□ -1.35
LIG1P18858 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.61□□□□□ -1.35
LIG1P18858 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.61□□□□□ -1.35
LIG1P18858 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.61□□□□□ -1.35
LIG1P18858 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.61□□□□□ -1.35
LIG1P18858 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 SELENOWP1-201ENST00000322792 252 ntBASIC6.61□□□□□ -1.35
LIG1P18858 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
LIG1P18858 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
LIG1P18858 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
LIG1P18858 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.61□□□□□ -1.35
LIG1P18858 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.61□□□□□ -1.35
LIG1P18858 MTCYBP24-201ENST00000420387 1106 ntBASIC6.61□□□□□ -1.35
LIG1P18858 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.61□□□□□ -1.35
LIG1P18858 GAPDHP48-201ENST00000436626 961 ntBASIC6.61□□□□□ -1.35
LIG1P18858 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.61□□□□□ -1.35
LIG1P18858 RPS26P30-201ENST00000443431 335 ntBASIC6.61□□□□□ -1.35
LIG1P18858 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
LIG1P18858 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.61□□□□□ -1.35
LIG1P18858 GAPDHP62-201ENST00000515313 990 ntBASIC6.61□□□□□ -1.35
LIG1P18858 RNU6-507P-201ENST00000516045 100 ntBASIC6.61□□□□□ -1.35
LIG1P18858 RNU6-1004P-201ENST00000516584 111 ntBASIC6.61□□□□□ -1.35
LIG1P18858 WBP1LP3-201ENST00000523033 208 ntBASIC6.61□□□□□ -1.35
LIG1P18858 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.61□□□□□ -1.35
LIG1P18858 OR5AK1P-201ENST00000524837 922 ntBASIC6.61□□□□□ -1.35
LIG1P18858 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.61□□□□□ -1.35
LIG1P18858 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.61□□□□□ -1.35
LIG1P18858 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.61□□□□□ -1.35
LIG1P18858 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.61□□□□□ -1.35
LIG1P18858 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.61□□□□□ -1.35
LIG1P18858 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
LIG1P18858 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.61□□□□□ -1.35
LIG1P18858 AL121757.2-201ENST00000611223 313 ntBASIC6.61□□□□□ -1.35
LIG1P18858 Y_RNA.804-201ENST00000615262 101 ntBASIC6.61□□□□□ -1.35
LIG1P18858 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.61□□□□□ -1.35
LIG1P18858 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.61□□□□□ -1.35
LIG1P18858 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.61□□□□□ -1.35
LIG1P18858 AC005618.4-201ENST00000625053 554 ntBASIC6.61□□□□□ -1.35
LIG1P18858 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.61□□□□□ -1.35
LIG1P18858 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
LIG1P18858 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.61□□□□□ -1.35
LIG1P18858 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
LIG1P18858 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
LIG1P18858 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
LIG1P18858 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
LIG1P18858 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.6□□□□□ -1.35
LIG1P18858 Z99496.1-201ENST00000469424 1477 ntBASIC6.6□□□□□ -1.35
LIG1P18858 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
LIG1P18858 RBPJP7-201ENST00000442803 1447 ntBASIC6.6□□□□□ -1.35
LIG1P18858 RBPJP5-201ENST00000449433 1447 ntBASIC6.6□□□□□ -1.35
LIG1P18858 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.6□□□□□ -1.35
LIG1P18858 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
LIG1P18858 HSPA8P17-201ENST00000427029 1382 ntBASIC6.6□□□□□ -1.35
LIG1P18858 TRIM51GP-201ENST00000534741 1350 ntBASIC6.6□□□□□ -1.35
LIG1P18858 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.6□□□□□ -1.35
LIG1P18858 RNU6-501P-201ENST00000364072 100 ntBASIC6.6□□□□□ -1.35
LIG1P18858 RNU1-136P-201ENST00000384181 164 ntBASIC6.6□□□□□ -1.35
LIG1P18858 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
LIG1P18858 AL590002.1-201ENST00000406554 418 ntBASIC6.6□□□□□ -1.35
LIG1P18858 RNU6-77P-201ENST00000410554 91 ntBASIC6.6□□□□□ -1.35
LIG1P18858 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.6□□□□□ -1.35
LIG1P18858 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LIG1P18858 AL590806.1-201ENST00000415818 853 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AL354766.1-201ENST00000423396 542 ntBASIC6.6□□□□□ -1.35
LIG1P18858 BX323845.3-201ENST00000428215 527 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.6□□□□□ -1.35
LIG1P18858 NFU1P2-201ENST00000448700 469 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.6□□□□□ -1.35
LIG1P18858 AL133244.1-201ENST00000456007 258 ntBASIC6.6□□□□□ -1.35
LIG1P18858 RPL30P9-201ENST00000465586 330 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AL672167.3-201ENST00000465951 960 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.6□□□□□ -1.35
LIG1P18858 RPL7P24-201ENST00000493052 752 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC6.6□□□□□ -1.35
LIG1P18858 AC008802.1-201ENST00000519121 791 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.6□□□□□ -1.35
LIG1P18858 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.6□□□□□ -1.35
LIG1P18858 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.6□□□□□ -1.35
LIG1P18858 AC006960.3-201ENST00000561845 705 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.6□□□□□ -1.35
LIG1P18858 AC092121.1-201ENST00000569452 202 ntBASIC6.6□□□□□ -1.35
LIG1P18858 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms