Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.56□□□□□ -1.52
ATF4P18848 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC5.56□□□□□ -1.52
ATF4P18848 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
ATF4P18848 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.56□□□□□ -1.52
ATF4P18848 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ATF4P18848 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.55□□□□□ -1.52
ATF4P18848 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
ATF4P18848 RNU5E-1-201ENST00000362477 120 ntBASIC5.55□□□□□ -1.52
ATF4P18848 RNU6-181P-201ENST00000363225 107 ntBASIC5.55□□□□□ -1.52
ATF4P18848 RN7SKP211-201ENST00000363328 315 ntBASIC5.55□□□□□ -1.52
ATF4P18848 RNA5SP238-201ENST00000365464 120 ntBASIC5.55□□□□□ -1.52
ATF4P18848 SNORA20.2-201ENST00000383922 131 ntBASIC5.55□□□□□ -1.52
ATF4P18848 SNORD51-201ENST00000384320 80 ntBASIC5.55□□□□□ -1.52
ATF4P18848 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.55□□□□□ -1.52
ATF4P18848 RN7SKP236-201ENST00000410635 284 ntBASIC5.55□□□□□ -1.52
ATF4P18848 RN7SKP17-201ENST00000411242 351 ntBASIC5.55□□□□□ -1.52
ATF4P18848 RPSAP60-201ENST00000415403 880 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 AC019097.1-201ENST00000424783 735 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 AC137499.1-201ENST00000427602 88 ntBASIC5.55□□□□□ -1.52
ATF4P18848 ELOCP14-201ENST00000428070 331 ntBASIC5.55□□□□□ -1.52
ATF4P18848 SNX18P14-201ENST00000429308 574 ntBASIC5.55□□□□□ -1.52
ATF4P18848 RPS27AP12-201ENST00000429552 465 ntBASIC5.55□□□□□ -1.52
ATF4P18848 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC5.55□□□□□ -1.52
ATF4P18848 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.55□□□□□ -1.52
ATF4P18848 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.55□□□□□ -1.52
ATF4P18848 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 ELOCP7-201ENST00000439968 331 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AL356133.1-201ENST00000444762 372 ntBASIC5.55□□□□□ -1.52
ATF4P18848 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.55□□□□□ -1.52
ATF4P18848 AC092421.1-201ENST00000448148 418 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AL353691.1-201ENST00000451332 387 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.55□□□□□ -1.52
ATF4P18848 MTND2P24-201ENST00000453434 806 ntBASIC5.55□□□□□ -1.52
ATF4P18848 MTND1P9-201ENST00000453775 944 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AC104308.1-201ENST00000454621 333 ntBASIC5.55□□□□□ -1.52
ATF4P18848 PSPC1P2-201ENST00000455130 225 ntBASIC5.55□□□□□ -1.52
ATF4P18848 RPS4XP19-201ENST00000460237 736 ntBASIC5.55□□□□□ -1.52
ATF4P18848 RPS4XP18-201ENST00000495480 763 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 RNU6-445P-201ENST00000516949 107 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC5.55□□□□□ -1.52
ATF4P18848 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 AP003497.1-201ENST00000528472 562 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AP003034.1-201ENST00000534621 422 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.55□□□□□ -1.52
ATF4P18848 AL512310.1-201ENST00000548639 172 ntBASIC5.55□□□□□ -1.52
ATF4P18848 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.55□□□□□ -1.52
ATF4P18848 AL157687.1-201ENST00000554853 619 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.55□□□□□ -1.52
ATF4P18848 AC005224.3-201ENST00000584683 2140 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.55□□□□□ -1.52
ATF4P18848 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.55□□□□□ -1.52
ATF4P18848 OR7E94P-202ENST00000601375 790 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AC011451.2-201ENST00000604303 598 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AC008277.2-201ENST00000605196 797 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.55□□□□□ -1.52
ATF4P18848 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.55□□□□□ -1.52
ATF4P18848 AC006329.2-201ENST00000611491 394 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AL590099.1-201ENST00000615276 138 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AC091925.2-201ENST00000625059 256 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AL590396.3-201ENST00000636334 300 ntBASIC5.55□□□□□ -1.52
ATF4P18848 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC5.55□□□□□ -1.52
ATF4P18848 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.55□□□□□ -1.52
ATF4P18848 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
ATF4P18848 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
ATF4P18848 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ATF4P18848 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.54□□□□□ -1.52
ATF4P18848 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
ATF4P18848 ADAM24P-201ENST00000398655 2101 ntBASIC5.54□□□□□ -1.52
ATF4P18848 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
ATF4P18848 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 250 ms