Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
PTPRFP10586 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.53□□□□□ -1.68
PTPRFP10586 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
PTPRFP10586 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.53□□□□□ -1.68
PTPRFP10586 AC005332.5-201ENST00000591222 2919 ntBASIC4.53□□□□□ -1.68
PTPRFP10586 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PTPRFP10586 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
PTPRFP10586 MTCO1P7-201ENST00000419523 1542 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 IL6STP1-201ENST00000346911 1020 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 RNU4-44P-201ENST00000363050 141 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 SNORD35B-201ENST00000363660 87 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 MIR490-201ENST00000384865 128 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 PGBD4P8-201ENST00000412993 562 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPRFP10586 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPRFP10586 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PTPRFP10586 RANP8-201ENST00000444720 713 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPRFP10586 AC093853.1-201ENST00000515689 483 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPRFP10586 IGLV3-26-201ENST00000520756 302 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 OR10D4P-201ENST00000525892 951 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 CYCSP30-201ENST00000546447 172 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 AL354760.1-201ENST00000608357 643 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPRFP10586 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPRFP10586 AC079684.1-201ENST00000621405 437 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPRFP10586 AC006971.1-201ENST00000407916 4486 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 AP002001.2-201ENST00000529025 1469 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPRFP10586 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
PTPRFP10586 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPRFP10586 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPRFP10586 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PTPRFP10586 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPRFP10586 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPRFP10586 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.52□□□□□ -1.69
PTPRFP10586 AC074029.4-201ENST00000624796 1859 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 AP004289.2-201ENST00000444413 1457 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 AC114814.2-201ENST00000419195 485 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPRFP10586 AC115115.1-201ENST00000449927 248 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPRFP10586 AC012158.1-204ENST00000483430 465 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 AC106707.2-201ENST00000484182 374 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 CDH12P2-201ENST00000504393 298 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPRFP10586 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPRFP10586 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.52□□□□□ -1.69
PTPRFP10586 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.52□□□□□ -1.69
PTPRFP10586 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.52□□□□□ -1.69
PTPRFP10586 LINC00561-201ENST00000565815 2738 ntBASIC4.52□□□□□ -1.69
PTPRFP10586 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PTPRFP10586 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPRFP10586 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PTPRFP10586 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPRFP10586 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPRFP10586 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTPRFP10586 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PTPRFP10586 BMS1P3-201ENST00000372011 932 ntBASIC4.51□□□□□ -1.69
PTPRFP10586 VN1R8P-201ENST00000407739 893 ntBASIC4.51□□□□□ -1.69
PTPRFP10586 Z74696.2-201ENST00000436514 498 ntBASIC4.51□□□□□ -1.69
PTPRFP10586 HSPD1P15-201ENST00000505573 1122 ntBASIC4.51□□□□□ -1.69
PTPRFP10586 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPRFP10586 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPRFP10586 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.51□□□□□ -1.69
PTPRFP10586 AC079171.1-201ENST00000568788 914 ntBASIC4.51□□□□□ -1.69
PTPRFP10586 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPRFP10586 AC243654.2-201ENST00000612843 443 ntBASIC4.51□□□□□ -1.69
PTPRFP10586 AC099654.11-201ENST00000638857 294 ntBASIC4.51□□□□□ -1.69
PTPRFP10586 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPRFP10586 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPRFP10586 SAMMSON-213ENST00000641336 1521 ntBASIC4.51□□□□□ -1.69
PTPRFP10586 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PTPRFP10586 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPRFP10586 RNU6-525P-201ENST00000363685 104 ntBASIC4.5□□□□□ -1.69
PTPRFP10586 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPRFP10586 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTPRFP10586 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPRFP10586 HIGD1AP4-201ENST00000430194 280 ntBASIC4.5□□□□□ -1.69
PTPRFP10586 RPL23AP89-201ENST00000439324 255 ntBASIC4.5□□□□□ -1.69
PTPRFP10586 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPRFP10586 TCP11X3P-202ENST00000514289 1254 ntBASIC4.5□□□□□ -1.69
PTPRFP10586 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPRFP10586 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.5□□□□□ -1.69
PTPRFP10586 AC025627.2-201ENST00000576220 160 ntBASIC4.5□□□□□ -1.69
PTPRFP10586 AC020914.6-201ENST00000594327 272 ntBASIC4.5□□□□□ -1.69
PTPRFP10586 AC008638.3-201ENST00000603341 463 ntBASIC4.5□□□□□ -1.69
PTPRFP10586 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
PTPRFP10586 AC243312.2-201ENST00000623340 601 ntBASIC4.5□□□□□ -1.69
PTPRFP10586 AC124312.6-202ENST00000623624 418 ntBASIC4.5□□□□□ -1.69
PTPRFP10586 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
PTPRFP10586 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTPRFP10586 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PTPRFP10586 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPRFP10586 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPRFP10586 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPRFP10586 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTPRFP10586 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms